TCONS_00040600-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00040600-protein
Unique NameTCONS_00040600-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length521

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00040600-protein ID=TCONS_00040600-protein|Name=TCONS_00040600-protein|organism=Clytia hemisphaerica|type=polypeptide|length=521bp
TACNKKVSITKSSIVPNSDMTSSTFYKNHPASSGRLDAAIQPCQSQWGAW
CATTGDIAPYLQIDLRLAREISKLETQGHPYDFMQSWVTQYAFNYSLDGQ
LWKSYNQVLFGNIDGSSKKLNELKPPVIARYIRFLPKKWEGDLPCMRVEA
YECLPRKESIPTLVYGLSDHTINRGKPLSINCLFRGLPNMTLVWNINQDY
LRTSSRIITSEVTTENEASSTLFIRRLTSAENGEISCISYYPTLQDIHAK
SAGTITVLAPIPELSIVNYTVGDSVIHLNHSGPYTRDVLGYRVKVSSVDG
VKDLDLPYNDTRKVTISKLRPYVTYNLQVAMRYLEDEIGPLYSSTDFETP
QDKPYGAPLNLHVTKISHDTLHATWDDPAPKLLNGLIIYYDVRYVKSDKS
DPSVRSRRAVSSNVAVFKRVFNSTAVLDRLEPGAIYEVSVRSYTKVGPGP
WVHPPELVFTGKATEELNSLKKMVITDANAAAVSNRLKNITADRTFLNKH
DVVLTLDILEKVVNKQNTSGE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024718XLOC_024718Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00040600TCONS_00040600Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR000421FA58C
IPR013783Ig-like_fold
IPR008979Galactose-bd-like
IPR007110Ig-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 260..339
e-value: 0.91
score: 18.5
coord: 355..449
e-value: 1.5E-9
score: 47.8
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 357..451
e-value: 5.7E-11
score: 42.5
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 260..352
score: 10.596
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 357..463
score: 17.049
IPR003961Fibronectin type IIICDDcd00063FN3coord: 356..454
e-value: 9.64921E-11
score: 57.5063
IPR003961Fibronectin type IIICDDcd00063FN3coord: 287..349
e-value: 0.00589271
score: 34.0091
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 277..456
IPR000421Coagulation factor 5/8 C-terminal domainSMARTSM00231disc_4coord: 2..153
e-value: 7.0E-8
score: 42.2
IPR000421Coagulation factor 5/8 C-terminal domainPFAMPF00754F5_F8_type_Ccoord: 26..148
e-value: 8.4E-21
score: 74.3
IPR000421Coagulation factor 5/8 C-terminal domainPROSITEPS50022FA58C_3coord: 3..153
score: 28.355
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 155..258
e-value: 6.7E-8
score: 31.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 351..462
e-value: 3.1E-17
score: 62.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 259..350
e-value: 2.4E-6
score: 27.2
IPR008979Galactose-binding domain-likeGENE3D2.60.120.260coord: 1..154
e-value: 5.8E-31
score: 107.0
IPR008979Galactose-binding domain-likeSUPERFAMILY49785Galactose-binding domain-likecoord: 12..153
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 161..256
score: 9.827
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 161..246
NoneNo IPR availableCDDcd00096Igcoord: 178..238
e-value: 7.80177E-4
score: 36.6983
NoneNo IPR availableCDDcd00057FA58Ccoord: 12..151
e-value: 9.22944E-29
score: 109.749

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040600-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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