TCONS_00040465-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00040465-protein
Unique NameTCONS_00040465-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length110

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00040465-protein ID=TCONS_00040465-protein|Name=TCONS_00040465-protein|organism=Clytia hemisphaerica|type=polypeptide|length=110bp
SLYNSVIVQKFGSSTKEALKELRQKTAGYMRTNEDDFLPFTSNTNTGDML
STEEYGKYCDDIENTTTWGGQLEIRAISNVYQQRVEIYQANAPRLVIGEE
HVASTPLRLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024609XLOC_024609Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00040465TCONS_00040465Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003323OTU_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003323OTU domainPFAMPF02338OTUcoord: 2..100
e-value: 8.7E-15
score: 55.2
IPR003323OTU domainPROSITEPS50802OTUcoord: 1..108
score: 13.488
NoneNo IPR availableSUPERFAMILY54001Cysteine proteinasescoord: 16..109

Blast
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BLAST of TCONS_00040465-protein vs. Swiss-Prot (Human)
Match: OTU6B (OTU domain-containing protein 6B OS=Homo sapiens GN=OTUD6B PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.446e-30
Identity = 47/88 (53.41%), Postives = 68/88 (77.27%), Query Frame = 0 
Query:   22 LRQKTAGYMRTNEDDFLPFTSNTNTGDMLSTEEYGKYCDDIENTTTWGGQLEIRAISNVYQQRVEIYQANAPRLVIGEEHVASTPLRL 109
            LR +TA YM+++ +DFLPF +N NTGDM + EE+ KYC+DI NT  WGGQLE+RA+S++ Q  +EI QA++P +++GEE+ +  PL L
Sbjct:  179 LRSQTAEYMQSHVEDFLPFLTNPNTGDMYTPEEFQKYCEDIVNTAAWGGQLELRALSHILQTPIEIIQADSPPIIVGEEY-SKKPLIL 265
The following BLAST results are available for this feature:
BLAST of TCONS_00040465-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OTU6B1.446e-3053.41OTU domain-containing protein 6B OS=Homo sapiens G... [more]
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