TCONS_00040450-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00040450-protein
Unique NameTCONS_00040450-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length206

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00040450-protein ID=TCONS_00040450-protein|Name=TCONS_00040450-protein|organism=Clytia hemisphaerica|type=polypeptide|length=206bp
RIELNFIVAIDFTASNGEPNRPDSLHYNTQNQPSQYVQALDAIGGVLEDY
DTDKRFPAYGFGAKIPPSQTVLHDFALNFNPQNPFCQGVQNIIGAYYHSI
RSVQLYGPTNFSPVINNTIRIAQQNPQGKQYFVLMILTDGIITDMNQTKE
AIVNAANLPISIIIVGVGTADFSGNSFMKSVKSSSVSEKYLKRLFSCHQS
LKNMCN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024595XLOC_024595Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00040450TCONS_00040450Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR010734Copine
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 3..195
e-value: 1.9E-10
score: 50.7
IPR002035von Willebrand factor, type AGENE3D3.40.50.410coord: 1..200
e-value: 5.5E-13
score: 48.7
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 5..206
score: 9.654
IPR002035von Willebrand factor, type ASUPERFAMILY53300vWA-likecoord: 3..185
IPR010734CopinePFAMPF07002Copinecoord: 24..178
e-value: 3.2E-61
score: 206.4

Blast
[Close]
BLAST of TCONS_00040450-protein vs. Swiss-Prot (Human)
Match: CPNE8 (Copine-8 OS=Homo sapiens GN=CPNE8 PE=1 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 2.343e-71
Identity = 104/172 (60.47%), Postives = 133/172 (77.33%), Query Frame = 0 
Query:    3 ELNFIVAIDFTASNGEPNRPDSLHYNTQNQPSQYVQALDAIGGVLEDYDTDKRFPAYGFGAKIPPSQTVLHDFALNFNPQNPFCQGVQNIIGAYYHSIRSVQLYGPTNFSPVINNTIRIAQQNPQGKQYFVLMILTDGIITDMNQTKEAIVNAANLPISIIIVGVGTADFSG 174
            ++NF VAIDFTASNG P +P SLHY    Q + Y  AL A+G +++DYD+DK FPA GFGAK+PP   + H+FALN NPQNP+C G++ ++ AYY S++SVQLYGPTNF+PVIN+  R A     G QYFVL+I+TDG+I+DM QTKE+IVNA+ LP+SIIIVGVG A+F  
Sbjct:  307 QINFTVAIDFTASNGNPAQPTSLHYMNPYQLNAYGMALKAVGEIVQDYDSDKMFPALGFGAKLPPDGRISHEFALNGNPQNPYCDGIEGVMEAYYRSLKSVQLYGPTNFAPVINHVARYASSVKDGSQYFVLLIVTDGVISDMAQTKESIVNASKLPMSIIIVGVGPAEFDA 478
The following BLAST results are available for this feature:
BLAST of TCONS_00040450-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CPNE82.343e-7160.47Copine-8 OS=Homo sapiens GN=CPNE8 PE=1 SV=2[more]
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