TCONS_00040226-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00040226-protein
Unique NameTCONS_00040226-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length741

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00040226-protein ID=TCONS_00040226-protein|Name=TCONS_00040226-protein|organism=Clytia hemisphaerica|type=polypeptide|length=741bp
KKCPQDWQDNEWFKDLGKEREILDLKVRCKNHRDGCTWQNELRDQEEHLK
TCDFVTIQCNLRCGEPVLRKNLKNHLDKDCPLISTCEYSDFGCLFKGTRD
QLYNHMSEAINQHFSLEMKHEIRNVKKEFSDKLQEKDLRIQELTKEFDAQ
LKERDDEIKRLRKDVEDAKNDLQRASNENNENHKAIEETKKDFTRVIDET
KIEQQKAIEETKKDFTRVIDETKIEQQKAIEETKKDFIGVVNETKIEQQK
AIEETKKDFIGVVNETKIEQQKAMEETKKDFTRVIDETRIEQQKAIEETK
KNVTQVVNETKIEQQKAIEETKKDFTRVIDETKIEQQKAIEETKKDLIGI
VNETKIEQQKASEETKKDVTRVIEETKIEQQKAIEETKKDFTRVIDETKI
EQQKAIEETKKDLIGIVNETKIEQQKAIEETKKDLIGIVNETKIEQQKAS
EETKKDLIGIVNETKIEQQKASEETKKDVTQVVNETKIEQQTAIEETKKD
VTRVVNETKTEQQKAIEETKKDFTQIVNETKNEQQKALNKSMEIMSMMLY
MNKNTHEFISGSLRERSDHVHNLNKKLAEENKLTLQILSLPQCPYYSFTI
ENFKTQFDEAKKTNKYIFSSNFLTANGYLGRLNIYLHGFSIGKDNHVSVY
FHNLKGPYDNSLKWPIPWKSLSLTLLVNNREIGKELHQSSSDGGIWKDNF
IRPIGDEGKDFGFAKAFDHKLIEHLTDEDVVAIKYDMDCET
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024408XLOC_024408Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00040226TCONS_00040226Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008974TRAF-like
IPR013083Znf_RING/FYVE/PHD
IPR001293Znf_TRAF
IPR002083MATH/TRAF_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 126..192
NoneNo IPR availablePRODOMPD968187coord: 135..557
e-value: 1.0E-4
score: 113.0
IPR008974TRAF-likeGENE3D2.60.210.10coord: 573..739
e-value: 5.3E-19
score: 68.2
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 25..97
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 592..734
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 77..112
e-value: 0.024
score: 14.3
coord: 19..76
e-value: 1.4E-13
score: 50.3
IPR001293Zinc finger, TRAF-typePFAMPF02176zf-TRAFcoord: 48..105
e-value: 1.7E-11
score: 44.5
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 48..102
score: 10.774
IPR002083MATH/TRAF domainPROSITEPS50144MATHcoord: 593..737
score: 9.933

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040226-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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