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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00040179-protein ID=TCONS_00040179-protein|Name=TCONS_00040179-protein|organism=Clytia hemisphaerica|type=polypeptide|length=382bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00040179-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2) HSP 1 Score: 236.498 bits (602), Expect = 3.616e-69 Identity = 103/227 (45.37%), Postives = 136/227 (59.91%), Query Frame = 0
Query: 98 LDGGWSAWGSWGSCSTACGSGTESRSRDCNNPTPLPGGS-CNGPSTESQSCNDGPCPVDGQWGSWTSWNTCTESCAGGTHSRSRSCDSPSPDHGGSQCSGSASDSQSCNTHPCPIHGVWTGWGSWQSCNITCGGGEENRTRTCTNPPPQHGGDPCSGDPIDIQSCNIHPCPIHGNWSQWSNWTECDKPCGVGFQNRSRTCTNPPPQHGGDNCTDHDAERSFCNEHPC 323
+ GG+S W +W +CS CG G + RSR CN P P GG C G E ++C + PCPVDG W W+ W CT SC G +R+R+C++PS HGG C G+A + CN PCP+HG W+ W W +C+ +CG G + R R C NPPP GG C G +Q CN CPIHG W+ W++W+ C CG G + R+R C++P PQ+GG C D + FCN PC
Sbjct: 4528 VHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPC 4754 HSP 2 Score: 232.646 bits (592), Expect = 7.776e-68 Identity = 110/231 (47.62%), Postives = 138/231 (59.74%), Query Frame = 0
Query: 98 LDGGWSAWGSWGSCSTACGSGTESRSRDCNNPTPLPGGS-CNGPSTESQSCNDGPCPVDGQWGSWTSWNTCTESCAGGTHSRSRSCDSPSPDHGGSQCSGSASDSQSCNTHPCPIHGVWTGWGSWQSCNITCGGGEENRTRTCTNPPPQHGGDPCSGDPIDIQSCNIHPCPIHGNWSQWSNWTECDKPCGVGFQNRSRTCTNPPPQHGGDNCTDHDAERSFCNEHPCTDMC 327
+DG WS W W C+ +CG G ++R+R CNNP+ GG C G + E CN PCPV G W +W W TC+ESC GT +R+R C++P P GGS C G+ + Q CN CPIHG W W SW +C+++CGGG RTR C++P PQ+GG C G + CN PCP HGNWS WS W C + C G R RTC NPPP +GG C D++ CN TDMC
Sbjct: 4585 VDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCN----TDMC 4811 HSP 3 Score: 225.328 bits (573), Expect = 2.588e-65 Identity = 104/227 (45.81%), Postives = 136/227 (59.91%), Query Frame = 0
Query: 98 LDGGWSAWGSWGSCSTACGSGTESRSRDCNNPTPLPGGS-CNGPSTESQSCNDGPCPVDGQWGSWTSWNTCTESCAGGTHSRSRSCDSPSPDHGGSQCSGSASDSQSCNTHPCPIHGVWTGWGSWQSCNITCGGGEENRTRTCTNPPPQHGGDPCSGDPIDIQSCNIHPCPIHGNWSQWSNWTECDKPCGVGFQNRSRTCTNPPPQHGGDNCTDHDAERSFCNEHPC 323
+ G WSAW WG+CS +CG GT++R+R CNNP P GGS C+G T+ Q CN+ CP+ G+W +W SW+ C+ SC GG R+R C P P +GG +C GS S CN+ PCP HG W+ W W +C+ TC GG+ R RTC NPPP +GG C G IQ CN CP+ G+W W +W++C CG G + R R C +P P GG C + + CN C
Sbjct: 4642 VHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRPCPGDTTQVTRCNVQAC 4868 HSP 4 Score: 171.785 bits (434), Expect = 5.806e-47 Identity = 77/171 (45.03%), Postives = 98/171 (57.31%), Query Frame = 0
Query: 98 LDGGWSAWGSWGSCSTACGSGTESRSRDCNNPTPLPGG-SCNGPSTESQSCNDGPCPVDGQWGSWTSWNTCTESCAGGTHSRSRSCDSPSPDHGGSQCSGSASDSQSCNTHPCPIHGVWTGWGSWQSCNITCGGGEENRTRTCTNPPPQHGGDPCSGDPIDIQSCNIHPCP 267
+ G W+ W SW +CS +CG G R+R C++P P GG C G +S CN PCP G W W+ W TC+ +C GG R R+CD+P P +GG C G S Q CNT CP+ G W W SW C+ +CGGGE+ R R C +P P GG PC GD + CN+ CP
Sbjct: 4699 IHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRPCPGDTTQVTRCNVQACP 4869 The following BLAST results are available for this feature:
BLAST of TCONS_00040179-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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