TCONS_00039873-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039873-protein
Unique NameTCONS_00039873-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length520

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039873-protein ID=TCONS_00039873-protein|Name=TCONS_00039873-protein|organism=Clytia hemisphaerica|type=polypeptide|length=520bp
MLKILVKAGAPMNLTNNEGQTPFDMAKQQPSGIMANKLAKYKAVCTQDLM
ETDKNYDRGFKFTKEDPLKDMTFDYKADHKAEIEDKIEKIVEDYQESSEV
DHAAKSNIEGTDIEVYIDPVNNKPYDTTLIKTLVKVNIHGHGQYGINSFY
KMQVIHHKAKGLYILFNRWGRVGLSNGQHQQTPFDTAEAVTSEFKKIFRS
KTANEWSRTDTFEKKAGKYNLLAREKNPERMKRFHKQVLKPFLDKSHLKQ
PNVEDGLVESRLDEHVYRLMKDITNYSELKAIESFFDKDRTPFGLISTES
IQKGKEILTKIREENEIQINIFENQKKQDKYEKLTNLTNEFYSIIPFTNF
DIEDTGIMKSRELNSWEDRLKQISDVSFAFSVLLAAQHRMQEVNPYDYCL
GSLDCRIEHMSAESDEAKLISKYIYREGKSCDAKVTGMFRVACQEDTKNY
RTDLKNKRLLFHGTKMAHIMSILKNGLQISPKGSIRSGSAYGKGIYFSYD
FETSNNYAKGKQNKYMFLCE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024134XLOC_024134Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039873TCONS_00039873Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008893WGR_domain
IPR012317Poly(ADP-ribose)pol_cat_dom
IPR004102Poly(ADP-ribose)pol_reg_dom
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003950NAD+ ADP-ribosyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006471protein ADP-ribosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006471 protein ADP-ribosylation
molecular_function GO:0003950 NAD+ ADP-ribosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 80..100
NoneNo IPR availableGENE3D3.90.228.10coord: 404..520
e-value: 1.6E-27
score: 96.2
NoneNo IPR availableCDDcd07997WGR_PARPcoord: 116..226
e-value: 3.19494E-31
score: 115.094
NoneNo IPR availableSUPERFAMILY56399ADP-ribosylationcoord: 403..520
IPR008893WGR domainSMARTSM00773WGR_clscoord: 125..213
e-value: 6.3E-23
score: 92.2
IPR008893WGR domainPFAMPF05406WGRcoord: 144..212
e-value: 2.7E-20
score: 72.1
IPR008893WGR domainGENE3D2.20.140.10coord: 139..215
e-value: 5.6E-20
score: 70.6
IPR008893WGR domainSUPERFAMILY142921WGR domain-likecoord: 110..222
IPR012317Poly(ADP-ribose) polymerase, catalytic domainPFAMPF00644PARPcoord: 414..520
e-value: 6.0E-22
score: 78.1
IPR012317Poly(ADP-ribose) polymerase, catalytic domainPROSITEPS51059PARP_CATALYTICcoord: 394..520
score: 27.444
IPR004102Poly(ADP-ribose) polymerase, regulatory domainPFAMPF02877PARP_regcoord: 260..399
e-value: 2.3E-16
score: 60.0
IPR004102Poly(ADP-ribose) polymerase, regulatory domainGENE3D1.20.142.10coord: 255..403
e-value: 2.1E-19
score: 69.3
IPR004102Poly(ADP-ribose) polymerase, regulatory domainPROSITEPS51060PARP_ALPHA_HDcoord: 259..384
score: 16.019
IPR004102Poly(ADP-ribose) polymerase, regulatory domainSUPERFAMILY47587Domain of poly(ADP-ribose) polymerasecoord: 259..400
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 1..112
e-value: 5.1E-6
score: 25.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..26
score: 10.02

Blast
[Close]
BLAST of TCONS_00039873-protein vs. Swiss-Prot (Human)
Match: PARP1 (Poly [ADP-ribose] polymerase 1 OS=Homo sapiens GN=PARP1 PE=1 SV=4)

HSP 1 Score: 122.865 bits (307), Expect = 2.109e-29
Identity = 103/388 (26.55%), Postives = 179/388 (46.13%), Query Frame = 0 
Query:  145 GINSFYKMQVIHHKAKGLYILFNRWGRVGLSNGQHQQTPFDTAEAVTSEFKKIFRSKTANEWSRTDTFEKKAGKYNLLAREKNPERMKRFHKQVLKPFLDKSHLKQPNVEDGLVESRLDEHVYRLMKDITNYSELK--AIESFFDKDRTPFGLISTESIQKGKEILTKIREENEIQINIFENQKKQDKYEKLTNLTNEFYSIIPFTNFDIEDTGIMKSRELNSWE------DRLKQISDVSFAFSVLLAAQHRMQEVNPYDYCLGSLDCRIEHMSAESDEAKLISKYIYREGKSC----DAKVTGMFRVACQEDTKNYRT--DLKNKRLLFHGTKMAHIMSILKNGLQISPKGSIRSGSAYGKGIYFSYDFETSNNYAKGKQNKYMFL 518
            G NS+YK+Q++    +  Y +F  WGRVG   G ++     + E     F K++  KT N W       K   KY            K+F+   +    D+  +K+  V  G  +S+L + V  L+K I +   +K   +E   D  + P G +S   IQ    IL+++++          +Q   D   ++ +L+N FY++IP       D G+ K   LN+ +      + L  + D+  A+S+L        + +P D     L   I+ +  +S+EA++I KY+     +     D +V  +F++  + + + Y+    L N+RLL+HG++  +   IL  GL+I+P  +  +G  +GKGIYF+     S NY    Q   + L
Sbjct:  565 GTNSYYKLQLLEDDKENRYWIFRSWGRVGTVIGSNKLEQMPSKEDAIEHFMKLYEEKTGNAW-----HSKNFTKYP-----------KKFYPLEIDYGQDEEAVKKLTVNPG-TKSKLPKPVQDLIKMIFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAAYSILSEVQQA--------VSQGSSD--SQILDLSNRFYTLIP------HDFGMKKPPLLNNADSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSK-DPIDVNYEKLKTDIKVVDRDSEEAEIIRKYVKNTHATTHNAYDLEVIDIFKIEREGECQRYKPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGL 918
The following BLAST results are available for this feature:
BLAST of TCONS_00039873-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PARP12.109e-2926.55Poly [ADP-ribose] polymerase 1 OS=Homo sapiens GN=... [more]
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