TCONS_00039568-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039568-protein
Unique NameTCONS_00039568-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length381

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039568-protein ID=TCONS_00039568-protein|Name=TCONS_00039568-protein|organism=Clytia hemisphaerica|type=polypeptide|length=381bp
MNGFEEIKIKIEQEEIHGCDETNHEHLEIVIKLEDESIGYEDDENMEPFK
NCENELSIISCRNEKGNDVTSPRKTDPKNYEITIKLEDESKSQDDNKNQS
AQLMDILENRNSVNINDGMNCFDQFSSIEEINSQIGEEITIKFDDELQKF
QNNENESLHEGIKAIECQECVESFPTKRNSVMHQVTVHEEINLFECQECG
KSFGKKSNLTLHQRTVHQGIKAFTCHECGKSFGQKANLTSHRRTVHQGIK
AFKCQECGLLFGRKYDLKRHHRIVHEGIKAFECQECGESFATKRNLVKHQ
VTVYEGINPFECQECGKSFGKKSNFTSHQRTVHQGIKAFKCQECSKCLAE
KRNLTSHQRTVHESVQAFKCQECGKMFFYRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023898XLOC_023898Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039568TCONS_00039568Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 165..188
e-value: 3.8
score: 16.5
coord: 339..362
e-value: 0.065
score: 22.4
coord: 281..301
e-value: 9.5
score: 13.5
coord: 194..217
e-value: 5.6E-4
score: 29.2
coord: 310..333
e-value: 8.9E-4
score: 28.6
coord: 252..275
e-value: 0.0075
score: 25.5
coord: 223..246
e-value: 4.6E-4
score: 29.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 254..275
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 312..333
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 225..246
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 341..362
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 196..217
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 223..251
score: 14.96
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 310..338
score: 15.022
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 252..280
score: 13.36
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 339..367
score: 11.843
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 194..222
score: 15.459
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 281..309
score: 12.715
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 261..319
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 164..215
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 202..261
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 318..377
NoneNo IPR availablePFAMPF16622zf-C2H2_11coord: 251..275
e-value: 2.9E-5
score: 23.6
NoneNo IPR availableGENE3D3.30.160.60coord: 350..381
e-value: 1.5E-7
score: 31.2
coord: 293..318
e-value: 3.4E-17
score: 62.1
coord: 178..202
e-value: 4.9E-14
score: 51.9
NoneNo IPR availableGENE3D2.20.28.10coord: 319..349
e-value: 4.2E-15
score: 55.3
NoneNo IPR availableGENE3D3.30.160.60coord: 252..266
e-value: 7.8E-7
score: 28.5
NoneNo IPR availableGENE3D3.30.160.60coord: 119..177
e-value: 9.9E-4
score: 19.0
coord: 267..292
e-value: 3.8E-14
score: 52.3
NoneNo IPR availableGENE3D2.40.155.10coord: 215..251
e-value: 3.4E-19
score: 69.4
NoneNo IPR availableGENE3D3.30.160.60coord: 203..214
e-value: 1.4E-7
score: 31.0
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 339..362
e-value: 0.0022
score: 18.3
coord: 223..246
e-value: 1.2E-6
score: 28.5
coord: 310..333
e-value: 4.7E-6
score: 26.7
coord: 194..217
e-value: 3.0E-6
score: 27.3
coord: 281..300
e-value: 1.8E-4
score: 21.7

Blast
BLAST of TCONS_00039568-protein vs. Swiss-Prot (Human)
Match: OZF (Zinc finger protein OZF OS=Homo sapiens GN=ZNF146 PE=1 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 4.464e-52
Identity = 100/224 (44.64%), Postives = 138/224 (61.61%), Query Frame = 0
Query:  154 ENESLHEGIKAIECQECVESFPTKRNSVMHQVTVHEEINLFECQECGKSFGKKSNLTLHQRTVHQGIKAFTCHECGKSFGQKANLTSHRRTVHQGIKAFKCQECGLLFGRKYDLKRHHRIVHEGIKAFECQECGESFATKRNLVKHQVTVYEGINPFECQECGKSFGKKSNFTSHQRTVHQGIKAFKCQECSKCLAEKRNLTSHQRTVHESVQAFKCQECGKMF 377
            ++++ H G K  EC EC +SF  K N + HQ  +H     FEC++CGK+F +KSNL  HQRT H G K F C ECGK+F  K+NLT H + +H G K FKC ECG  FG+K  L +H  I H G K +EC ECG++F+ + +L+ H V ++ G  P+EC  CGK+F + S+ T H R+ H G K + C EC K  ++   L  H R +H   + ++C ECGK F
Sbjct:   61 KHQNTHTGEKLFECNECGKSFSQKENLLTHQ-KIHTGEKPFECKDCGKAFIQKSNLIRHQRT-HTGEKPFVCKECGKTFSGKSNLTEHEK-IHIGEKPFKCSECGTAFGQKKYLIKHQNI-HTGEKPYECNECGKAFSQRTSLIVH-VRIHSGDKPYECNVCGKAFSQSSSLTVHVRS-HTGEKPYGCNECGKAFSQFSTLALHLR-IHTGKKPYQCSECGKAF 277          

HSP 2 Score: 172.555 bits (436), Expect = 4.888e-51
Identity = 100/225 (44.44%), Postives = 136/225 (60.44%), Query Frame = 0
Query:  153 NENESLHEGIKAIECQECVESFPTKRNSVMHQVTVHEEINLFECQECGKSFGKKSNLTLHQRTVHQGIKAFTCHECGKSFGQKANLTSHRRTVHQGIKAFKCQECGLLFGRKYDLKRHHRIVHEGIKAFECQECGESFATKRNLVKHQVTVYEGINPFECQECGKSFGKKSNFTSHQRTVHQGIKAFKCQECSKCLAEKRNLTSHQRTVHESVQAFKCQECGKMF 377
             E+E  H   K  EC EC ++F  K+  + HQ T H    LFEC ECGKSF +K NL  HQ+ +H G K F C +CGK+F QK+NL  H+RT H G K F C+ECG  F  K +L  H +I H G K F+C ECG +F  K+ L+KHQ  ++ G  P+EC ECGK+F ++++   H R +H G K ++C  C K  ++  +LT H R+ H   + + C ECGK F
Sbjct:   32 TEHEHFHTREKPFECNECGKAFSQKQYVIKHQNT-HTGEKLFECNECGKSFSQKENLLTHQK-IHTGEKPFECKDCGKAFIQKSNLIRHQRT-HTGEKPFVCKECGKTFSGKSNLTEHEKI-HIGEKPFKCSECGTAFGQKKYLIKHQ-NIHTGEKPYECNECGKAFSQRTSLIVHVR-IHSGDKPYECNVCGKAFSQSSSLTVHVRS-HTGEKPYGCNECGKAF 249          

HSP 3 Score: 150.984 bits (380), Expect = 7.447e-43
Identity = 90/201 (44.78%), Postives = 121/201 (60.20%), Query Frame = 0
Query:  180 SVMHQVTVHEEINLFECQECGKSFGKKSNLTLHQRTVHQGIKAFTCHECGKSFGQKANLTSHRRTVHQGIKAFKCQECGLLFGRKYDLKRHHRIVHEGIKAFECQECGESFATKRNLVKHQVTVYEGINPFECQECGKSFGKKSNFTSHQRTVHQGIKAFKCQECSKCLAEKRNLTSHQRTVHESVQAFKCQECGKMFFYR 380
            S + Q  ++   N F C+ CGK F  KSNLT H+   H   K F C+ECGK+F QK  +  H+ T H G K F+C ECG  F +K +L  H +I H G K FEC++CG++F  K NL++HQ T + G  PF C+ECGK+F  KSN T H++ +H G K FKC EC     +K+ L  HQ  +H   + ++C ECGK F  R
Sbjct:    2 SHLSQQRIYSGENPFACKVCGKVFSHKSNLTEHEH-FHTREKPFECNECGKAFSQKQYVIKHQNT-HTGEKLFECNECGKSFSQKENLLTHQKI-HTGEKPFECKDCGKAFIQKSNLIRHQRT-HTGEKPFVCKECGKTFSGKSNLTEHEK-IHIGEKPFKCSECGTAFGQKKYLIKHQ-NIHTGEKPYECNECGKAFSQR 196          

HSP 4 Score: 132.88 bits (333), Expect = 5.364e-36
Identity = 80/172 (46.51%), Postives = 104/172 (60.47%), Query Frame = 0
Query:  211 LHQRTVHQGIKAFTCHECGKSFGQKANLTSHRRTVHQGIKAFKCQECGLLFGRK-YDLKRHHRIVHEGIKAFECQECGESFATKRNLVKHQVTVYEGINPFECQECGKSFGKKSNFTSHQRTVHQGIKAFKCQECSKCLAEKRNLTSHQRTVHESVQAFKCQECGKMFFYRK 381
            L Q+ ++ G   F C  CGK F  K+NLT H    H   K F+C ECG  F +K Y +K  H+  H G K FEC ECG+SF+ K NL+ HQ  ++ G  PFEC++CGK+F +KSN   HQRT H G K F C+EC K  + K NLT H++ +H   + FKC ECG  F  +K
Sbjct:    4 LSQQRIYSGENPFACKVCGKVFSHKSNLTEHEH-FHTREKPFECNECGKAFSQKQYVIK--HQNTHTGEKLFECNECGKSFSQKENLLTHQ-KIHTGEKPFECKDCGKAFIQKSNLIRHQRT-HTGEKPFVCKECGKTFSGKSNLTEHEK-IHIGEKPFKCSECGTAFGQKK 169          

HSP 5 Score: 88.5817 bits (218), Expect = 6.460e-20
Identity = 48/120 (40.00%), Postives = 75/120 (62.50%), Query Frame = 0
Query:  154 ENESLHEGIKAIECQECVESFPTKRNSVMHQVTVHEEINLFECQECGKSFGKKSNLTLHQRTVHQGIKAFTCHECGKSFGQKANLTSHRRTVHQGIKAFKCQECGLLFGRKYDLKRHHRI 273
            +++++H G K  EC EC ++F ++R S++  V +H     +EC  CGK+F + S+LT+H R+ H G K + C+ECGK+F Q + L  H R +H G K ++C ECG  F +K    RH +I
Sbjct:  173 KHQNIHTGEKPYECNECGKAF-SQRTSLIVHVRIHSGDKPYECNVCGKAFSQSSSLTVHVRS-HTGEKPYGCNECGKAFSQFSTLALHLR-IHTGKKPYQCSECGKAFSQKSHHIRHQKI 289          
The following BLAST results are available for this feature:
BLAST of TCONS_00039568-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OZF4.464e-5244.64Zinc finger protein OZF OS=Homo sapiens GN=ZNF146 ... [more]
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