TCONS_00039325-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00039325-protein
Unique Name	TCONS_00039325-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	422

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00039325-protein ID=TCONS_00039325-protein|Name=TCONS_00039325-protein|organism=Clytia hemisphaerica|type=polypeptide|length=422bp
MKVLKTIFKGSISITAVVLGIKLQHDRLSTNHILTAKETPKYTLEHVQLV
FRHGARTPVCTYDLPGVEPAVWDPEKFLGDLPHTNVDYTLKLVSTGEEVL
LESIDPSSWSKRRLKGGMQTGKLTKNGQQMAFDVGQHLQKEYIQERKFIS
SIYSPNEIRVRTSSFQRTVGTVKSMLAGLYGKDQIREPIEMWTVRSQEEY
LYPNFYQCPNLNRHFKVAKKDFINFRPDIREITIDINKKLGLVEKEQMID
VFHLLDIMHTREAHGFKALPDNLTKEDRQKIETAASKLFSFIIQGDNDRN
ILRLSVGALVEDLCQNIEEKVKNPKKVHKMEFVSAHDTTLQGLLMVTNQW
KDEWPYYVSLFKIELYKDEASEYYVRLEFNGQTIFLDQSQHEEMVPIRTF
LEKMEKFRVKDYKLECSKEEGK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_023700	XLOC_023700	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00039325	TCONS_00039325	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000560	His_Pase_clade-2
IPR029033	His_PPase_superfam
IPR033379	Acid_Pase_AS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003993	acid phosphatase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003993	acid phosphatase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000560	Histidine phosphatase superfamily, clade-2	PFAM	PF00328	His_Phos_2	coord: 43..380 e-value: 3.9E-15 score: 56.0
IPR000560	Histidine phosphatase superfamily, clade-2	CDD	cd07061	HP_HAP_like	coord: 43..380 e-value: 3.98058E-13 score: 66.2436
IPR029033	Histidine phosphatase superfamily	GENE3D	3.40.50.1240		coord: 42..422 e-value: 3.2E-55 score: 187.1
IPR029033	Histidine phosphatase superfamily	SUPERFAMILY	53254	Phosphoglycerate mutase-like	coord: 116..416 coord: 43..73
IPR033379	Histidine acid phosphatase active site	PROSITE	PS00616	HIS_ACID_PHOSPHAT_1	coord: 44..58

Blast

[Close]

BLAST of TCONS_00039325-protein vs. Swiss-Prot (Human)
Match: PPA6 (Lysophosphatidic acid phosphatase type 6 OS=Homo sapiens GN=ACP6 PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 7.038e-45
Identity = 114/383 (29.77%), Postives = 202/383 (52.74%), Query Frame = 0

Query:   44 LEHVQLVFRHGARTPVCTYDLPGVEPAVWDPEKFLGDLPHTNVDYTLKLVSTGEEVLLESIDPSSWSKRRLKGGMQTGKLTKNGQQMAFDVGQHLQKEYIQERKFISSIYSPNEIRVRTSSFQRTVGTVKSMLAGLYGKDQIREPIEMWTVRSQEEYLYPNFYQCPNLNRHFKVAKKDFINFRPDIREITIDINKKLGLVEKEQMIDVFHLLDIMHTREAHGFKALPDNLTKEDRQKIETAASKLFSFIIQGDNDRNILRLSVGALVEDLCQNIEEKVKN---PKKVHKMEFVSAHDTTLQGLLMVTNQWKDEWPYYVSLFKIELYKD-EASEYYVRLEFNGQTIFLDQSQHEEMVPIRTFLEKMEKFRV--KDYKLECSKEE 420
            L+ VQ+VFRHGAR+P+    LP  E   W+P+  L   P T  DYT+  ++ G +    S   S + +  LKGGM  G+LTK G Q  F +G+ L+K Y+++  F+S  ++P E+ +R+++  R + + + +LAGL+ + Q   PI + T  +  E LYPN+  C +L +     ++   + +P I E    +  ++G ++    +D F LLD +   +AH   + P  + K   + IE  A     +I+  + DR  L+++VG  +  L  N+ + V +   P K+ K+   +AHD T   LLM    +  +WP +     +ELY+  E+ E++V+L ++G+   + +   + + P+  FL  M  + +  + Y   CS+ +
Sbjct:   50 LKMVQVVFRHGARSPL--KPLPLEEQVEWNPQ-LLEVPPQTQFDYTVTNLAGGPKPY--SPYDSQYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSPTFNPQEVFIRSTNIFRNLESTRCLLAGLF-QCQKEGPIIIHTDEADSEVLYPNYQSCWSLRQR-TRGRRQTASLQPGISEDLKKVKDRMG-IDSSDKVDFFILLDNVAAEQAHNLPSCP--MLKRFARMIEQRAVDTSLYILPKE-DRESLQMAVGPFLHILESNLLKAVDSATAPDKIRKLYLYAAHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQ-VPRGCPDGLCPLDMFLNAMSVYTLSPEKYHALCSQTQ 420

The following BLAST results are available for this feature:

BLAST of TCONS_00039325-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00039325-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PPA6	7.038e-45	29.77	Lysophosphatidic acid phosphatase type 6 OS=Homo s...	[more]

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TCONS_00039325-protein (polypeptide) - C. hemisphaerica