TCONS_00039314-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039314-protein
Unique NameTCONS_00039314-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length295

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039314-protein ID=TCONS_00039314-protein|Name=TCONS_00039314-protein|organism=Clytia hemisphaerica|type=polypeptide|length=295bp
MIMLSLVILSMATLVPHFCEARRYPHRHSVMKDVGFIDPVIPSCRPGDTL
DEKMAGIEWKFGRCNKEVDNVYYKRRSRKCKDEPDDKCIPKPGTGVLGLG
GPVSPESSGKDCDVLQEQSILSACDCSEMKPLEWGAWTCVSEYRHRSRRC
GLKEGTDKCSYKRCDGKSLKEETIDCDFCGKTRNWEAWGEWGDCDLKGYR
HRSRTCEYNDPELKCDDKHNCKSDESRQKKFFPTCCRERNWESWGPWGKC
DSEGYIHRQRKCEPKDPESECDKSTCKEGEDGEKKRNIEKCCAPR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023694XLOC_023694Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039314TCONS_00039314Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 241..293
e-value: 0.53
score: 11.7
coord: 185..227
e-value: 0.28
score: 14.2
NoneNo IPR availableGENE3D2.30.90.10coord: 184..230
e-value: 6.9E-4
score: 19.6
coord: 240..291
e-value: 0.0011
score: 19.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..286

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039314-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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