TCONS_00038910-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00038910-protein
Unique NameTCONS_00038910-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length423

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00038910-protein ID=TCONS_00038910-protein|Name=TCONS_00038910-protein|organism=Clytia hemisphaerica|type=polypeptide|length=423bp
MEPGLEDFTKDELATFLRRTFPADLADKIISHELDGKLFGTLIRTPDQYF
LLSSMEFTIKEVLQFQTVYPITKNHNDTPTRKSIKASTPMTNRLLKRQKN
LQQKQLRAEVKRKWSDDRLPASFADKENKEELDAFVDWLHGESTTSLRML
EHMGKNKIRSSILTIVHERRRNIKEMRKSGSQNQVAAEQVRRQLDMNEDE
RENQKDKLPQATCANKRKTCSPHVSPVKRKCSQRKLTPKKPKKTLAIFNP
QIVKTIRHKFQSESQNQILDTVSVSQTSPVLFPEVREEIDDDPTKSLSDV
SVASNKSTCYSPSSPEYSLQHETQDTQAVSRVHASANEVVRQFKLDDISR
HEHLILARLTLGKFNRDKIKEKCEKYDIPVPAREKKVTDECVEFAKGMLR
AKKLTILNRPVETVDDIFIPVYE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023381XLOC_023381Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00038910TCONS_00038910Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014727TopoI_cat_a/b-sub_euk
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003917DNA topoisomerase type I activity
Vocabulary: Cellular Component
TermDefinition
GO:0005694chromosome
Vocabulary: Biological Process
TermDefinition
GO:0006265DNA topological change
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006265 DNA topological change
cellular_component GO:0005694 chromosome
molecular_function GO:0003677 DNA binding
molecular_function GO:0003917 DNA topoisomerase type I activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 187..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..238
IPR014727DNA topoisomerase I, catalytic core, alpha/beta subdomainGENE3D1.10.132.10coord: 185..402
e-value: 0.065
score: 13.2

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038910-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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