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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00038664-protein ID=TCONS_00038664-protein|Name=TCONS_00038664-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1466bp
MKVFEIKKEPPHLCLWATKPIKENEEISYFYGKYDQPWYQSPDDTDGQTQ
DITHDGRTQDESHDDTDRTGKTEYVQAKVSETESPDLKPLETRHSSDNQD
ATHDGQSQDNTHHGRPQNKIHDETDCAALVKLRMSKQRLLKQNPSPEPKG
AAKQRHPTSTGFQAYYYISDISSHENPPETRHSSDNQDATHYGQTQDATH
DGQTQDNTHDGRPQNKSHDKTDSTGKTHNVQAKVAETKSPDLISEPKEET
AKQHHPTSTEFQADISSDKKPLETRHSSDNQDATHGQTQDATHDGRPQNK
IHDNTDSAALVKLRMSKQKLLKQNPFPEPKEAAKQRHPTSIGFQADISSD
EKPPETRHSSDNQDATHDGQTQDNTHDGRPQNKSHDNTDSTGETHYVQAK
VAETKSPDLISEPKEDTAKQHHPISTEFQADVSSDQKSLETRSSSDNQDA
THDGQTQDRNHDDTDSTGETHYVQVKVAEIESPDLISEPNKETAKQYHPI
STEFQANVSSYQKPLETRNSSDNQDSHQSSSYDIDFVTQRSILNDSGLLA
DVDLTIIDTDDDDISDEINELLSGVSDIFDIGQISMEIENGLNCVENGKT
KIDKDGETTIDKDGETTIDKDGETTIDKDGETTIDKDGKTTIDKDGETTI
DKDGETTIEKDGETTIDKDGETTIDKDGETTNDKDGETTNDKDEETTIEK
DGETTNDKDGETTNDKDGETAIDKDGETEVGTGEEEPPHNTKKSKKKPSR
PCPFCDPSKEIHFNSALSRHIRTKHKNLPLVKLALSKPKKEKDAMFQDFK
RRGIEMYNAKEISKNSPSLVFERKQGEGDVDITKYTKCSNCKIFVKKTYW
PRHKGSCSDSVPPMAVPISAEPAIVCSDLFKQNILNKFRSDQIGNLCRND
EPILQFGINAFDKIKRRIDKQVEVRNSVRNEMRRLAGLYIEFKNQDVVLS
KYDNSADMIRRENFHVLKKAIETFTVKGDDLKAGKKASLFYNIKNLAKTL
KVNLLIAVKDEEARAVDDFLSILESSKDNVFGEATQKIHKNRQIKLRKPV
EMPLEEDIKMLRDHFLERIESFTNDYQLLDSSGYIELRDNVCARLTLFNA
RRGGEPARMLLENLEEANSGAWLDPRRVNSIEDPFDISLFNSLKITYQMG
KGNFKLVPVLIPKDLDKALDKLKNPEIRKDVGVLPSNCYVFPATQGSDAH
VGGWQSIKTICKKLELQNEKTITATKQRHRMSTIFASLDLPEMERERFFD
HMGHSEEINRNVYQAPPAMAEILTVGKHLRNIDGGANGVPVVNVANSAPG
PSSKRKETGRKRRKTKAINMKKKKVNVEYIGAKVKLRKNAKTNYFESGED
SEGLDEDSFDEYAPSDTNESSDEEELGPPHKKKIIAAGRKNFRWTTVQEQ
ALSKEFGPFLKATCGKSKPDEASMKKFVDKYGNGIMTIRKLEVKINNERS
KSLKQIAALKKSMNML Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013762 | Integrase-like_cat |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006310 | DNA recombination |
| GO:0015074 | DNA integration |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0015074 |
DNA integration |
| biological_process |
GO:0006310 |
DNA recombination |
| molecular_function |
GO:0003677 |
DNA binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR013762 | Integrase-like, catalytic domain | GENE3D | 1.10.443.10 | | coord: 1049..1277
e-value: 6.2E-6
score: 25.4 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1346..1378 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 601..752 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1292..1315 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 35..473 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 511..531 |
Blast
The following BLAST results are available for this feature:
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