|
|
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00038092-protein ID=TCONS_00038092-protein|Name=TCONS_00038092-protein|organism=Clytia hemisphaerica|type=polypeptide|length=807bp
MVVPFMVRWQLYFLTRHVLERSEKEIEILGKFVKMCVEEFPEGECYKQLL
QTGQNTMELLQHPSNLIYAQMSPNNETILHRAIKDDTPKRDVDITFVTDL
VDLGADFKVKDNGGKTPFSLAALNRNYAVMKMMLETGRISKDQIQNAMFE
ILYFIPLETPINQVESLFELLKTYDGNMNVRNRSQQSLVEYCVSSPRWLP
SLDVFKYLVNTCPKSCLKRSDRLSLIHTFVENQRRSESVLRYLCELNDID
VNERDNEQLTPLIKSIMRSDLEFCKVLLEKGADDMTCLHYAASIPASNKI
NDHHKITKILLKHGAVIEAKDCFGDTPIVYAASTGDTKVFKVFWRKHQKL
APIDSALSDRLITVAMLTGFDSLVDEIEKLRSSDNINESTKDAPMPRKGI
SLTNDSWKVWLQEKENEMILNAENDQKPRIIDAFQERDKMLQIENNEIQR
QFSVLLERISKYGYDFPFTPILSGSNVEGTKIGVLDEIDFLCQLKFILKP
EQYEILTMNVSNLKQIKIISGSDIANLSDFIDEESFLSSRKIAAQLWKIF
ASSFKKEDIWKDLYFTRPWWEDDSLHTGGVSFISTINLIWNSANIKRLHI
SVDLVPTLILPKEEGVIENSKSFEILQKHFELDSEIGKNLLVSKKVDSEF
VNEQDKSIIWRKSYSFVEAAIFQQLPQCARDGYKLTKFVRDSRICPAFTH
VDTKSVDKLITSYVLKTCLFHEVAMEIEAEKQLESFTSIQWGTKILNRLE
SYMNNTKSKVPAFFDENISLSIKGQFHVSPDIVIKMVIAFCEIGKKWLSQ
PWDFIDV Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 431..451 |
| None | No IPR available | PFAM | PF13637 | Ank_4 | coord: 223..278
e-value: 5.3E-5
score: 23.6
coord: 285..343
e-value: 3.4E-5
score: 24.2 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 220..339
e-value: 2.94672E-20
score: 87.0538 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 110..278
e-value: 9.89545E-8
score: 50.0746 |
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 74..109
e-value: 210.0
score: 10.0
coord: 257..282
e-value: 3000.0
score: 1.4
coord: 221..253
e-value: 620.0
score: 6.5
coord: 283..319
e-value: 0.0028
score: 26.9
coord: 113..143
e-value: 0.7
score: 18.9
coord: 323..352
e-value: 1400.0
score: 4.0 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 42..143
e-value: 1.4E-8
score: 34.0 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 161..454
e-value: 3.6E-27
score: 94.5 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 74..355
score: 22.543 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 177..345
coord: 64..138 |
| IPR024810 | Mab-21 domain | PFAM | PF03281 | Mab-21 | coord: 478..766
e-value: 1.1E-12
score: 47.8 |
Blast
The following BLAST results are available for this feature:
|
