TCONS_00038072-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00038072-protein
Unique NameTCONS_00038072-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2024

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00038072-protein ID=TCONS_00038072-protein|Name=TCONS_00038072-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2024bp
MSSYVSVANAIKEIEHWLRLTCFLHDPIKNSLLQVLHNKLKDLSYQGIPD
NPVALYQFFSNNKKTLNQLVQNKILKKDQLELLLPTGGNQTFSSEFDVTL
IALLIQKFTNLPPPAGKKGWRNKNPPSTDTSIAAFVIRAREWRNFINHIA
AKTIDLILFQQKWQEGCDIIKGLKYTYNTTFLETMPLDPKHHLVLQSLKK
CFAKLKSNQKTISDEVQDIQCDVFDIQSDTTTIKKDVTDTQDNVADIRRD
VADNQDSVVDIRRDVADTQDSVVDIRRDVADTQDSVVDIRRDVADTQDSV
VDIRRDVADTQDSVVDIRRDVADTQDSVVDIRRDVADTQDSVVDIRRDVA
DTQDSVVDIRRDVADTQDSVVDIRRDVADTQDSVVDIRRDVADTQDSVVD
IRRDVADTQDSVVDIRRDVADTQDSVVDIRRDVADTQDSVVDIRRDVADT
QDSVVDIRRDVADTQDSVVDIRRDVADTQDSVVDIRRDVADTQDSVVDIR
RDVADTQDSVVDIRRDVADTQDSVVDIRRDVADTQDSVVDIRRDVADTQD
SVVDIRRDVADTQDSVVDIRRDVADTQDSVVDIRRDVADTQDSVVDIRRD
VADTQDSVVDIRRDVADTQDSVVDIRRDVADTQDSVVDIRRDVADTQDSV
VDIRRDVADTQDSVVDIRRDVADTQDSVVDIRRDVADTQDSVVDIRRDVA
DTQDSVVDIRRDVADTQDSVVDIRRDVADTQDSVVDIRRDVADTQDSVVD
IRRDVADTQDSVVDIRRDVADTQDSVVDIRRDVADTQDSVVDIRRDVADT
QDSVVDIRRDVADTQDSVVDIRRDVADTQDSVVDIRRDVADTQDSVVDIR
RDVADTQDSVVDIRRDVADTQDNVADIRRNVADINTNISEMDKNLGNVQK
EVTEMKNEIQDKDESIAVIKSDIKNINTENIDRDGKFADLKENVYEMAKQ
IDNISQAVELLNNLSPKETKSGCDDFCLQEVRQYVSSKIGDQNAKLLQRL
GKDKNDETNVEEAIEYVPWFELRKNLLKLGRCDMVDYIVENTLITEGLYE
ASRLLKHKTIKKLIDWLVKEPFSLSSSNTCYVPREEKFVNLTILNSTEYE
KKFSNSDCEILRNQRLKTKDGMKIVDLFQKNDDIVVARGVAGCGKTSLVE
MYNLKWAKGELDTDFKIEFMFTFACRELNNLVNEKTTLEEIFKTCYPEVF
ELITLDDLKSLGSKVMIVIDGLDELHNIYELENKLVSDIHHVQTVRQIID
QKFIPGHKTIVCGRPKACQFLQNYVLDTRNTKTVEICGFTYENTVEYIRK
FFNNKEKSARLIEKLRLSDNLRQMCTIPIFLWIVCHIFNEQLIPTNLETI
TEIYFYSCLVFLRNHLRINNSSGRMDFHTIVNDRKILNIIYSLMKLSTKL
YMNNQVIFTSKEMGEIQFECDLEKTGFFTKFEGSAMKEPTFQFTHLVFQE
FFSGMYLAITKSVASYKSNRELTSCLPTILAAQRMLSNIENELFVAFFNN
LEQIYQSTPKTLIEKALSLKNRIKFNKYISDQKKLPNCMIRNKTVFIDLD
EPKCTDFLATYFEARFEIDNIGNLSNFQFEKVELTVQFNDRNAHFFITQH
NLPAKLPSCCKIQSNCLNIENENSFGKWLIFVAEDKHRIDRSTFPDGDII
IDESYPIRRDSQIFVESLYFMTQIRKLESTDFPKRFILNNTLMMRRNILP
DLQTFIGIVFKEKLKLPQMSHCLAVDTLIFDIDIEQIIFILKAANIRTVE
IPEYYLVLSDKETIELKQTLCSPFVKRLETENIDAIRKGLSLCQLKKSLS
DYEIEHIHSLLQNANIKLLQFKINHDIFGMFEINCNHPQWQLKLAYPESY
DINYNNVPELSIRGLPEKYYVQFNNLMTEMNNPIIKKFEFYFEESVVNEE
FMKLMRRCVKTNLKRIRVRFTELFAGYGLYEENKITLCFNHPSMQYSLYL
ETFCEEFLPEKVMFSLMGGDGVKTENGREMIRSMLTYAIGKKMHITVYKS
REENMVENFMKENKFDTYENLKMF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_022731XLOC_022731Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00038072TCONS_00038072Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007111NACHT_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 867..915
NoneNo IPR availableGENE3D1.20.5.730coord: 919..996
e-value: 0.4
score: 10.3
NoneNo IPR availableGENE3D1.20.5.170coord: 682..785
e-value: 1.0E-4
score: 21.9
coord: 290..372
e-value: 1.8E-4
score: 21.0
coord: 194..289
e-value: 1.4E-4
score: 21.4
NoneNo IPR availablePFAMPF05729NACHTcoord: 1134..1304
e-value: 3.2E-17
score: 62.9
NoneNo IPR availableGENE3D1.20.120.330coord: 373..502
e-value: 4.6E-7
score: 29.1
coord: 786..918
e-value: 2.8E-12
score: 46.0
NoneNo IPR availableGENE3D1.10.287.620coord: 503..681
e-value: 3.0E-11
score: 42.5
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 197..465
IPR007111NACHT nucleoside triphosphatasePROSITEPS50837NACHTcoord: 1133..1267
score: 14.084

Blast
[Close]
BLAST of TCONS_00038072-protein vs. Swiss-Prot (Human)
Match: NAL12 (NACHT, LRR and PYD domains-containing protein 12 OS=Homo sapiens GN=NLRP12 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 2.808e-24
Identity = 95/389 (24.42%), Postives = 167/389 (42.93%), Query Frame = 0 
Query: 1135 VVARGVAGCGKTSLVEMYNLKWAKGELDTDFKIEFMFTFACRELNNLVNEKTTLEEIFKTCYPEVFELITLDDLKSLGSKVMIVIDGLDELHNIYE---------LENKLVSDIHHVQTVRQIIDQKFIPGHKTIVCGRPKACQFLQNYVLDTRNTKTVEICGFTYENTVEYIRKFFNNKEKSARLIEKLRLSDNLRQMCTIPIFLWIVCHIFNEQLIPTNL-----ETITEIYFYSCLVFLRNHLRINNSSGRMDFHTIVNDRKILNIIYSLMKLSTKLYMNNQVIFTSKEMGEIQFECDLEKTGF----------FTKFEGSAMKEPTFQFTHLVFQEFFSGMYLAITKSVASYKSNRELTSCLPTILAAQRMLSNIENELFVAFFN 1499
            VV +G AG GK+ L     L WA G+L    + +++F   CRE+N    E +  + IF +C+PE      L +L  +  +++ +IDG DEL   +           E K  +++     +  +I +K +P    ++  RP A + L   +   R+   VEI GF+     EY  K+F+N E++ ++   +R ++ L  MC +P+  W+VC    +QL    L      T T +Y    +++L + ++    + R+      N R        L  L+     N +++F  +         DL K G              F+     E  + F HL FQEFF+ MY  + +       ++++T  L     ++R    + +       N
Sbjct:  213 VVMQGAAGIGKSMLAHKVMLDWADGKLFQG-RFDYLFYINCREMNQSATECSMQDLIF-SCWPE--PSAPLQELIRVPERLLFIIDGFDELKPSFHDPQGPWCLCWEEKRPTEL----LLNSLIRKKLLPELSLLITTRPTALEKLHRLLEHPRH---VEILGFSEAERKEYFYKYFHNAEQAGQVFNYVRDNEPLFTMCFVPLVCWVVCTCLQQQLEGGGLLRQTSRTTTAVY----MLYLLSLMQPKPGAPRLQ--PPPNQR-------GLCSLAADGLWNQKILFEEQ---------DLRKHGLDGEDVSAFLNMNIFQKDINCERYYSFIHLSFQEFFAAMYYILDEGEGGAGPDQDVTRLLTEYAFSERSFLALTSRFLFGLLN 568
The following BLAST results are available for this feature:
BLAST of TCONS_00038072-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NAL122.808e-2424.42NACHT, LRR and PYD domains-containing protein 12 O... [more]
back to top