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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00036951-protein ID=TCONS_00036951-protein|Name=TCONS_00036951-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1237bp
MLGQIANYCPVISRKTIVKSSTSIESIWQVIRAHYGFQSSGAHFLDLADI
KLEHGERPEDLFQRLMAFTEDSLLTPGGGISHHGDQPTEEEELTPSLENI
VVLLWLKLTHPDLPRLVKQRYGTELRSRTLASIKPEISQALETLLDEINT
ASDARVMRTFNTQIGQYRPQSSSKDLKRQTKPTCPLCKQAGRRSTDHLLS
TCNFLPESDRRYITRTRLLAALDDIDLDDTDDTEQLPEEPTPTSRSVTLE
KSSTVQRVKVGQSPFINAYHHHVPVTVILDSGAETNMISESVAIKLNAKL
SKSNQHALQADGQSPLHVKGETRLTLSRGSETFHLEALVVENLDVDILGG
VPFMEVNDITIRPSKQQVILANGSSIRYDLPSKNPPQVRLTTTTLRAPST
TTVWPGDYIELSSPFSSLTDSAIAFEPHIQSPSESWPSPDIVETVDGMLR
IPNNTSHPINIRKSQHIAQIAPAFVPPVTTETNNPSRSPSSSTGSQLHYK
AIQTDPESILPETVRSKFHELHQSFADTFNPKFPGYNGNVGPLKATVNMG
PVEPPQRKGRLPQYSRNKLDELQSEFDRLESLGVFKRPEELGITVEYLNP
SFLVKKPSGGHRLVTSFTEIGTYSKPQPSLMPDVDSTLRRIGLWKYLIKT
DLTSAFFQIPLDRSSLKYCGVATPFRGIRVYTRSAMGMPGSETALEELMC
AVLGDLIVEGCVVKIADDLYCGGETPDELLRNWEKVLLALSNSSLRLSAS
KTVIAPKSTSILGWKWQQGTLTATTHRLTALSTCDPPKTVKGLRSFIGAF
KVLSRVIPRCSNLLSPLEESVAGRTSAEPITWDNNLLSNFKKAKQALNDP
KTIHLPRPDDQLWIVTDGAVKTHGLGATLYITRDDNKPLLSGFFSAKLKR
RQIDWFPCELEALCIAASIKHFSPYIVQSNHKPCVLTDSKPCVQAHQKLS
RGSFSTSSKLTTFMSAASRYQALVRHLSGTANTPSDFTCRNAEECLDDLC
QVCRYVSEIEQSPVRAVSVKDIISGTVKLPFTTRSTWRSVQSEDPDLRRT
HAHLTQGTRPSKKATNIRDVKRYLQSATIARDGLLVVRQEEPFAPTVERI
VIPRNSFPGLLASLHIRLDHPSPHQMKQVLRRHFFALDMDPLTDEMSASC
HLCASLQTIKHASEPQTTSASPTTVGSQFASDVIRRNKQFILVLREYVTS
FTNSIIIDGKIRSPFVTPSSPSCHKFVRLTDPKPPSV Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR021109 | Peptidase_aspartic_dom |
| IPR001969 | Aspartic_peptidase_AS |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004190 | aspartic-type endopeptidase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006508 | proteolysis |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006508 |
proteolysis |
| molecular_function |
GO:0004190 |
aspartic-type endopeptidase activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | GENE3D | 3.10.10.10 | | coord: 544..683
e-value: 1.0E-8
score: 34.7 |
| None | No IPR available | GENE3D | 3.30.70.270 | | coord: 773..903
e-value: 8.5E-17
score: 60.7 |
| None | No IPR available | GENE3D | 3.30.70.270 | | coord: 684..772
e-value: 2.2E-7
score: 30.3 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 229..250 |
| None | No IPR available | CDD | cd01647 | RT_LTR | coord: 597..765
e-value: 1.94842E-23
score: 98.8217 |
| None | No IPR available | CDD | cd00303 | retropepsin_like | coord: 266..355
e-value: 3.62554E-12
score: 63.5096 |
| None | No IPR available | SUPERFAMILY | 56672 | DNA/RNA polymerases | coord: 525..947 |
| IPR021109 | Aspartic peptidase domain | GENE3D | 2.40.70.10 | | coord: 260..380
e-value: 4.5E-13
score: 48.8 |
| IPR021109 | Aspartic peptidase domain | SUPERFAMILY | 50630 | Acid proteases | coord: 260..349 |
| IPR001969 | Aspartic peptidase, active site | PROSITE | PS00141 | ASP_PROTEASE | coord: 277..288 |
Blast
The following BLAST results are available for this feature:
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