TCONS_00036919-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036919-protein
Unique NameTCONS_00036919-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length289

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036919-protein ID=TCONS_00036919-protein|Name=TCONS_00036919-protein|organism=Clytia hemisphaerica|type=polypeptide|length=289bp
MKILACLLLLLSIYMVNGDNTRDIKTLKSSLQLLLKRIELKSSYCSAQAQ
GQCGTCICKDDFSLRKKYYCDCRNQSPQRDCLAHRQNGMKIDGYYTVTMN
GSRTTQVYCDQTTSGGGLTVIQRRMDGSTNFYRRWNTYKVGFGKLHREFW
LGNENIHLLSLQAVYPKGSELMINMRLHAGNYWYRYSHFQVDSERSHYLL
HVSGASGNLSPSLFVSYQNKVEFSTWDKDRDGSSSYNCARDYQFSGWWIN
GAGNKCTGYQAAGPYGKYRTRTWYKRINAYSIIIQPLLR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021807XLOC_021807Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036919TCONS_00036919Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 76..287
e-value: 2.6E-41
score: 153.2
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 78..267
e-value: 1.4E-43
score: 149.1
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 72..268
score: 41.714
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 72..270
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 17..221
e-value: 1.4E-51
score: 174.7
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 222..283
e-value: 3.0E-10
score: 39.6

Blast
[Close]
BLAST of TCONS_00036919-protein vs. Swiss-Prot (Human)
Match: TENR (Tenascin-R OS=Homo sapiens GN=TNR PE=1 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 2.135e-36
Identity = 80/203 (39.41%), Postives = 107/203 (52.71%), Query Frame = 0 
Query:   77 PQRDCLAHRQNGMKIDGYYTVTMNG--SRTTQVYCDQTTSGGGLTVIQRRMDGSTNFYRRWNTYKVGFGKLHREFWLGNENIHLLSLQAVYPKGSELMINMRLHAGNYWYRYSHFQVDSERSHYLLHVSGASGNLSPSLFVSYQNKVEFSTWDKDRDGSSSYNCARDYQFSGWWINGAGNKCTGYQAAGPYGKYRTR---TWY 274
            PQ DC  H  NG  + G Y + +NG  S+  QVYCD TT GGG  V QRR +G T+F+R+W  Y+VGFG +  EFWLG +NIH ++ Q  Y    EL ++MR      +  Y  F V+  R+ Y L +   +G    SL  SY     FST D+D D + + NCA  Y+ + W+ N     C      G YG+ R      WY
Sbjct: 1135 PQ-DCAQHLMNGDTLSGVYPIFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVGFGNVEDEFWLGLDNIHRITSQGRY----ELRVDMRDGQEAAFASYDRFSVEDSRNLYKLRIGSYNGTAGDSL--SYHQGRPFSTEDRDNDVAVT-NCAMSYKGAWWYKN-----CHRTNLNGKYGESRHSQGINWY 1324
The following BLAST results are available for this feature:
BLAST of TCONS_00036919-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TENR2.135e-3639.41Tenascin-R OS=Homo sapiens GN=TNR PE=1 SV=3[more]
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