TCONS_00036869-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036869-protein
Unique NameTCONS_00036869-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length777

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036869-protein ID=TCONS_00036869-protein|Name=TCONS_00036869-protein|organism=Clytia hemisphaerica|type=polypeptide|length=777bp
MSAMKTAFTEALQASANSTLCETCPIQNLHKLCNNLEGVTTIAEKDTMVH
ETIKILSDYEQLHVLNEVNEEDPESDNERIEITINVLRVLFDDKQKSHKH
SHKQLLTSSMEMEQRDRLGSSQNSTFFDKAKKSFTSSLQNFSMKKARAKT
FSNLGLDFDIKRPLANTKPLITNGNRTPADLKPRSRSLENDAPEFRNNSS
RLELNLDSDAATQRPRRASSIEGVEKKVPQVVKEEKEDSFPSSHETSNVQ
QPVKKRPLRRESSWRQAIYHSVVVTNSRRSSSSSIVTITGENDERKNKAQ
SIDVGERARSRWRNAIHNQILLIRMEKENKKLAANISATEIRRQKLSYQD
LASYTAEAAQAWDDLIGHKNNEKIDRQYLLELVRGGIPRARRGEVWQFLI
NQNQFRKPDTSDKQCWKETPYRTLLKRNSGHQHAILIDLGRTFPTHAHFI
PRLGSGQISLFNILAAYSQLDDEVGYCQGLSFVAGVLLMHMPEEEAFQSF
CHLMFELQIRSQYKPDMDAVQQQLYQLSRLLHDYHPKVYEHFNKFDVTPT
LYAAPWFLTLYASQYPIGFVSRVMDMVLLEGMEVIFKVALVLIGNHANEI
LEKTSFESIVDYMKLELPNKVVTETDDVSMRALNMDIRQQLNLYEVEYQL
LNEEMLDIRQSKEKLEKQEAVLEEVKKQMSDLKNELAESQQTVQILRGSL
DEANQRNLEYEQKIEAMIKENKMLKASASSSQTDGQNTDKNWNLVPSPPT
IERDMNGRRAFSLDSSVMSSEENIADL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021774XLOC_021774Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036869TCONS_00036869Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR021785DUF3350
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 322..342
NoneNo IPR availableCOILSCoilCoilcoord: 634..727
NoneNo IPR availableGENE3D1.10.8.270coord: 411..505
e-value: 1.0E-25
score: 89.3
NoneNo IPR availableGENE3D1.20.5.340coord: 600..736
e-value: 1.9E-5
score: 23.9
NoneNo IPR availableGENE3D1.10.10.750coord: 254..401
e-value: 3.8E-6
score: 26.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..302
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 725..757
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 383..604
e-value: 3.9E-73
score: 259.0
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 392..601
e-value: 8.4E-55
score: 185.6
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 386..581
score: 32.497
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 516..621
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 364..541
IPR021785Domain of unknown function DUF3350PFAMPF11830DUF3350coord: 292..332
e-value: 1.6E-10
score: 41.0

Blast
[Close]
BLAST of TCONS_00036869-protein vs. Swiss-Prot (Human)
Match: TBCD4 (TBC1 domain family member 4 OS=Homo sapiens GN=TBC1D4 PE=1 SV=2)

HSP 1 Score: 387.882 bits (995), Expect = 9.842e-119
Identity = 200/443 (45.15%), Postives = 293/443 (66.14%), Query Frame = 0 
Query:  285 IVTITGEND----ERKNKAQSIDVGERARSRWRNAIHNQILLIRMEKENKKLAANISATEIRRQKLSYQDLASYTAEAAQAWDD-LIGHKNNEKIDRQYLLELVRGGIPRARRGEVWQFLINQNQFRKPDTSDKQCWKETPYRTLLKRNSGHQHAILIDLGRTFPTHAHFIPRLGSGQISLFNILAAYSQLDDEVGYCQGLSFVAGVLLMHMPEEEAFQSFCHLMFELQIRSQYKPDMDAVQQQLYQLSRLLHDYHPKVYEHFNKFDVTPTLYAAPWFLTLYASQYPIGFVSRVMDMVLLEGMEVIFKVALVLIGNHANEILEKTSFESIVDYMKLELPNKVVTETDDVSMRALNMDIRQQLNLYEVEYQLLNEEMLDIRQS---KEKLEKQEAVLEEVKKQMSDLKNELAESQQTVQILRGSLDEANQRNLEYEQKIEAMIK 719
            +V ++GE+D    E + K++ +      RS WR AIH QILL+RMEKEN+KL A+    + R+ KL Y+++ +   E    WD  L+  +   + D + +  L++ G+P++RRGE+WQFL  Q + R     +KQ   +  Y+ LLK+ +  QHAIL+DLGRTFPTH +F  +LG GQ+SLFN+L AYS LD EVGYCQG+SFVAGVLL+HM EE+AF+    LM++L  R QY+PDM ++Q Q+YQLSRLLHDYH  +Y H  + +++P+LYAAPWFLTL+ASQ+ +GFV+RV D++ L+G EVIFKVAL L+ +    I+E  SFE+IV+++K  LP+   +E + +  +   MDI +QL+ YEVEY +L +E+ +   S    E LEK E    ++K+Q  DL  +L  +   +Q L  +L+      L  E K++++I+
Sbjct:  818 VVFLSGEDDPEKIEERKKSKEL------RSLWRKAIHQQILLLRMEKENQKLEASRDELQSRKVKLDYEEVGACQKEVLITWDKKLLNCRAKIRCDMEDIHTLLKEGVPKSRRGEIWQFLALQYRLRH-RLPNKQQPPDISYKELLKQLTAQQHAILVDLGRTFPTHPYFSVQLGPGQLSLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHMSEEQAFEMLKFLMYDLGFRKQYRPDMMSLQIQMYQLSRLLHDYHRDLYNHLEENEISPSLYAAPWFLTLFASQFSLGFVARVFDIIFLQGTEVIFKVALSLLSSQETLIMECESFENIVEFLKNTLPDMNTSEMEKIITQVFEMDISKQLHAYEVEYHVLQDELQESSYSCEDSETLEKLERANSQLKRQNMDLLEKLQVAHTKIQALESNLENL----LTRETKMKSLIR 1249
The following BLAST results are available for this feature:
BLAST of TCONS_00036869-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBCD49.842e-11945.15TBC1 domain family member 4 OS=Homo sapiens GN=TBC... [more]
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