TCONS_00036835-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036835-protein
Unique NameTCONS_00036835-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1510

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036835-protein ID=TCONS_00036835-protein|Name=TCONS_00036835-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1510bp
MMASFLLWMTLWSMMLSLSCLVKGQDIPCNPDVYNVFDSTTIFQRSSGNI
VPSNSRSFICDDGINHDVWQRFISPAGSEMPTTCPPQFACGTRYPVWLND
THPTSYNQATNVKACINVEGVCCLQEIQIQAARCRDNVKNEDFFVYKLAQ
LTLACPVGYCIGKEVRCPAGQTSTTGFTPCHDEFPKQRSLPKVTVDVHNS
RIRFTCDFEIETIRANNRYNVTWYSTTGTAAPKILKVDPLENDQTKSFLR
NENTLRTINERAFCLNQNIFCEVRSFFAGSEDKSDFKRSNVFYAGIKISP
TNIVISEQGSAQDVTLTSTVPIVCNEGSPTCGVNIRINQNDKNAKIEDRC
SLRFKRGDVTKKMNVAATRDFIDDNDRLLKIKFNVPRHANPLDWYCTSPL
PDVTLTAKDAPTRQCKTTGDPYIYTFDHNWFPHYKVGDYILVKSSARVFE
VHARVFECHTSVSCNCGVAAREGDDVMVVDMCQTGKAPIIKFASTIEPQQ
GSRIERVPGGKTFILNFPSGARVTFVYRNPSSDIIVSLPPDDYQNTRGLC
GTWNGNTNDEFTSASGQVIPGRWSSSIAARMDDFTESYRFKDFGRESLFY
YQGEKEGRCNSTRIPTYCSCEGDGNYQTDDSKITCDNSGLANRPKYQTKG
KKPAELIFPGQGCGKRRRRRRSIEDDGRNVIIMPDEDPASTIYDFNPPQI
TTPPPTFPTSSGITQQQAEQSCNRALKESKSGKICLQVIPTLDITPFLQQ
CIDDTKVLDDSRTSIISAVAAMMEECEEETLRNVTLWTADDNGNLQPPQA
VGDTLCPSDCSGNGGCVNSTCVCNAGFLSVDCSIKEGDPPVLERVASDGL
CDIRKQDCLRTRVIGQNYVESDKLACGTKKLKVEGLILEGRSTSNMLSSK
SDLLSFRDLSCEIPEQHLPLVDLDFSPVRPGRPVGGVSIQLSNDGETFSN
ESSNYIAYDSKCVECNSTTDCRWKVDSCRVNNYCIAVGEPNFEDWCQICR
GNNTFTERTDNVAPIFRPRSTQKAFHDHTLRFTVPVTDPEQKILKFNFVG
RTPDNMEISSAGVITWTAAKENKTYNVRIRATDICGTFSEATYMFESVFC
PCEKLNGAKCGAYPSVNCQCPKGCMGKNCTQAIKGEECIIKTEKERIPPK
KSYFHLECQSNGLKAAFNLSHLERHGLPYIVRFKGEDHDCKPLNSTYGNL
YGDGKLWIAANYSDCGIKAYEEGGKIAFEQTIVVEYGAKMDSSLIQRQFF
DTYNATCSIERNITRQWNMSVAKRRTINSEEDDESNFGFDFKTLKAGTKA
WTGLVYVGEKMDFDLSLNGVSNSIKTSPQDCYATRLDGTGRYDLIKNKCS
VGGETGVTITSTPQDTSHFSWEMEAFRYFGDSDGIIITCRILICRNRPIG
QLTDECRRCGQRPFPLRRKRDAAKEDEINVLTDKSVKSLPIFIAVRDAPD
KAALKESGRKSSSNDLGATETTALIVIAGLVGSVLCVAIAKKVFFNNPAT
KEVHLLSPKE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021762XLOC_021762Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036835TCONS_00036835Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001507ZP_dom
IPR001846VWF_type-D
IPR013783Ig-like_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001507Zona pellucida domainSMARTSM00241zp_4coord: 1157..1412
e-value: 1.2E-4
score: -17.7
IPR001507Zona pellucida domainPROSITEPS51034ZP_2coord: 1157..1413
score: 19.571
IPR001846von Willebrand factor, type D domainSMARTSM00216VWD_2coord: 403..566
e-value: 3.6E-12
score: 56.4
IPR001846von Willebrand factor, type D domainPFAMPF00094VWDcoord: 415..566
e-value: 1.4E-13
score: 51.3
IPR001846von Willebrand factor, type D domainPROSITEPS51233VWFDcoord: 414..638
score: 18.74
NoneNo IPR availableGENE3D2.60.40.1510coord: 105..833
e-value: 1.2E-5
score: 25.2
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1002..1096
e-value: 1.3E-9
score: 38.1

Blast
BLAST of TCONS_00036835-protein vs. Swiss-Prot (Human)
Match: VWDE (von Willebrand factor D and EGF domain-containing protein OS=Homo sapiens GN=VWDE PE=2 SV=4)

HSP 1 Score: 181.03 bits (458), Expect = 1.063e-45
Identity = 166/607 (27.35%), Postives = 270/607 (44.48%), Query Frame = 0
Query:   14 MMLSLSCLVKGQDIPCNPDVYNVFDSTTIFQR-SSGNIVPSNSRSFICDDGINHDVWQRFISPAGSEMPTTCPPQFACGTRYPVWLN----DTHPTSYNQATNVKACINVEGV------CCLQEIQIQAARCRDNVKNEDFFVYKLAQLTLACPVGYC---IGKEVRCPAGQTSTTGFTPCHDEF-----PKQRSLPKVTVDVHNSRIRFTCDFEIETIRANNRYNVTWYSTTGTAAPKILKVDPLENDQTKSFLRNENTLRTINERAFCLNQNIFCEVRSFFAGSED-KSDFKRSNVFYAGIKISPTNIVISEQGSAQDVTLTSTVPIVCNEGSPT---CGVNIRINQ-NDKNAKIEDRCSLRFKRGDVTKKMNVA------------ATRDFIDDNDRLLKIKFNVPRHANPLDWYCTSPLPD-VTLTAKDAPTRQCKTTGDPYIYTFDHNWFPHYKVGDYILVKSSARVFEVHARVFEC---HTSVSCNCGVAAREGDDVMVVDMC--QTGKAPIIKFASTIEPQQGSRIERVPGGKTFILNFPSGARVTFVYRNPSSDIIVSLPPDDYQNTRGLCGTWNGNTNDEFTSASGQVIPGRWSSSIA 578
            ++++L  L  G+   C+P  +    S     R  S ++  S  +  ICD  ++   ++  I    +EMPT C     CGT+ P+WL+    +T P S  +   + AC   + +      CCL +I +    C +      F VY L Q T  C +GYC   I      P G   T     C  +      P     P+V V++  SR+   C F++   + +  +++ W       + + +K +  +    ++F   E  L  IN R   L   IFC    FF  +   +S    S  F+AG K+ P    ISE G    + + STVPI+C+E S     C +++++         +    +L     D+ +  + A            A  DF  D DR+  I   V +     D+   + +PD + +  KD PT  C T  DP+I TFD   + ++K G ++L KS +R FEVH R ++C   H  VSCNCG  A+EG D++  DMC  Q  ++    F  + +  +  +I     G+   + F SGA +          + +  P  DY+NT GLCGT++ N  ++F   +G  I   +++ +A
Sbjct:    8 LVIALMFLAWGEAQECSPGGHQFLRSPYRSVRFDSWHLQQSAVQDLICDHSLSPGWYRFLILDRPAEMPTKCVEMNHCGTQAPIWLSLRDSETLP-SPGEIKQLTACATWQFLFSTTKDCCLFQIPVSVRNCGN------FSVY-LLQPTQGC-MGYCAEAISDARLHPCGSDETETGGDCVRQLAASLPPPPAGRPEVLVELIESRLFCRCSFDVPATKNSVGFHIAW----SRLSSQEVKEELTQETTVQAFSLLE--LDGINLR---LGDRIFCSASVFFLENPHVQSVAIESQEFFAGFKLQPELSTISEDGKEYYLRIESTVPIICSEFSELDQECKISLKLKTIGQGREHLGLNLALSSCHVDLLQTSSCANGTCSHTFVYYTAVTDFSRDGDRVSNI---VVQPIVNEDFLWNNYIPDSIQIKVKDVPTAYCYTFTDPHIITFDGRVYDNFKTGTFVLYKSMSRDFEVHVRQWDCRSLHYPVSCNCGFVAQEGGDIVTFDMCNGQLRESQPYLFIKSQDVTRNIKISESYLGRKVTIWFSSGAFIRADLGEWGMSLTIRAPSVDYRNTLGLCGTFDENPENDFHDKNGMQIDQNFNNYVA 593          

HSP 2 Score: 136.732 bits (343), Expect = 4.775e-32
Identity = 117/450 (26.00%), Postives = 187/450 (41.56%), Query Frame = 0
Query:  705 PTFPTSSGITQQQAEQSCNRALKESKSGKICLQVIPTLDITPFLQQCIDDTKVLDDSRTSIISAVAAMMEECEEETLRNVTLWTADDNGNLQPPQAVGDTLCPSDCSGNGGCVNSTCVCNAGFLSVDCSIKEGDPPVLERVASDGLCDIRKQDCLRTRVIGQNYVESDKLACGTKKLKV---EGLILEGRSTSNMLSSKSDLLSFRDLSCEIPEQHLPLVDLDFSPVRPGRPVGGVSIQLSNDGETFSNESSNYIAYDSKCVECN--STTDCRWKVDSCRVNNYCIAVGEPNFEDWCQICR---GNNTFTERTDNVAPIFRPRSTQ-KAFHDHTLRFTVPVTDPEQKILKFNFVGRTPDNMEISSAGVITWTAAKENKTYNVRIRATDICGTFSEATYMFESVFCPCEKLNGAKC----------GAYPSVNCQCPKGCMGKNCTQAIKG 1135
            P++PT SG+T+      C   L  S  G++CL  +    +   ++ C+ D  +L D  +   + VA +  ECE+  +      T +   +++   +V    CP+ CSGNG C+   C C+  F S DCS      P +  + + G CD++K +C+  RV G+ + E   + C   KL+    E +  E   T  +  +       R + C++P     +   D   +  G+P G   +++SNDG  FSN     I YD  C  C       C  K + C ++  C   G+ N    C ICR      T++   +N  P+ +    + + F+     +     DPE   + F  +   P+   +SSAG+  W       T  + +R  D C   +E     E     C+ LNG  C          G Y    C C  G  G  C   I G
Sbjct:  793 PSWPTPSGLTEYSTLTLCQETLANSSIGRLCLAFLGK-RLDSVIEMCVKDV-LLKDDLSWAEAGVALLENECEKRIVEEGKYNTEEYGTSIEDILSV--LKCPNLCSGNGQCMEWGCACSPSFSSYDCSDSYDKAPEITELGNAGFCDVQKYNCMMVRVFGKGFKELPSIKCEVTKLQYNSSEWMPGEPIYTQTVFHNS------RAVDCQLPTD---VQQFDTMDLVGGKPTGKWQLKVSNDGYKFSNPKITVI-YDGACQVCGLYKNDSCTIKENVCIIDGLCYVEGDKNPTSPCLICRPKISRFTWSFLENNQPPVIQALQDKLQTFYGENFEYQFVAFDPEGSDIHFT-LDSGPEGASVSSAGLFMWKTDLLT-TQQITVRLNDDCD--AETRVTIEVTVKSCDCLNGGSCVSDRNFSPGSGVYL---CVCLPGFHGSLCEVDISG 1221          
The following BLAST results are available for this feature:
BLAST of TCONS_00036835-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VWDE1.063e-4527.35von Willebrand factor D and EGF domain-containing ... [more]
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