TCONS_00036688-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00036688-protein
Unique Name	TCONS_00036688-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	901

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00036688-protein ID=TCONS_00036688-protein|Name=TCONS_00036688-protein|organism=Clytia hemisphaerica|type=polypeptide|length=901bp
YAEYAKFVKVLYSEKLSNGVIYDILEPPDMDLPSTTASGGRSSPLSTKTF
LTDLDDLDVERERMPYVESFALSPNLFEEYKKNICKEFLEHLQLWEEDSK
TKAESIMMAKIEETNNELDLRLHLHDPRPGRAEKDVHDVRLTELTAHQDR
VDQHCAGVLEALESIKRSYQDMSFGHLQENDKFRKSVEELEVSFTAASNT
HELKAMQEEVHGKLDQFNEIIRASIRHFRNTLDTTLNKLRGSNAQFRKSL
KIFSVGGNFSPEEVDEFRKRLERMASKIDHCEGNVTGELEGLENKRLEVA
KENAGKLEDRFKHHLFDMTFIEKIKRWLTNIQVKIKAEVANSNSQGQHLS
KMISVFNTKLKLIKNPQVDSEKFTASEAYETLIPILKEFRNRVKYLNCAV
KKERVAVVIPTTVDTLVKTTLEKQREKAAMRGARNKRLPLQQKSSKLGGK
GKKTSNLAQMAQLVQGGALSAASKQVLTATPKTAVASKSPLPPPPSETPS
SATNDGGETAPSTPAPPKPTTAGYSMRRNSGVRTSLGGKYDKKYLAFGDP
SQEPEKPDKHFLALQIKILQSGLDGLLSSAEHYYRQKGTRHPTRPKVIND
TFDLCAESVIGRLRKYKTQTESYHNDCIQEFRAQIKLFNGIMIELPSLLM
ISLITKHQNTRSNAQKDISNTLQSKIEISERLKKEHQTLLRPTLGHPNNK
PELDKLKSSEKSRQKESEKSLDDYQKLMLDCINMSVRSFVIELNEKVNTL
LSQFDVALTLDEVIIGDPKMKPKAEKELLRENQKQRKQEESEKQNQQQNL
SKNEDQFETPTPHYWPKLDTSSLIESGILKATDFLTIPNSMKQTEAHKAV
IKARDEEFQHFLDNQSLEREELKKSCDVIRNENERWKNNWKTSIKKITQL
Y

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_021662	XLOC_021662	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00036688	TCONS_00036688	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027914	DUF4456

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 862..889
None	No IPR available	COILS	Coil	Coil	coord: 264..284
None	No IPR available	COILS	Coil	Coil	coord: 773..806
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 481..535
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 688..720
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 428..453
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 774..812
IPR027914	Domain of unknown function DUF4456	PFAM	PF14644	DUF4456	coord: 576..780 e-value: 1.3E-51 score: 175.2

Blast

[Close]

BLAST of TCONS_00036688-protein vs. Swiss-Prot (Human)
Match: CC180 (Coiled-coil domain-containing protein 180 OS=Homo sapiens GN=CCDC180 PE=2 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.208e-53
Identity = 181/663 (27.30%), Postives = 317/663 (47.81%), Query Frame = 0

Query:  251 KIFSVGGNFSPEEVDEFRKRLERMASKIDHCEGNVTGELEGLENKRLEVAKENAGKLEDRFKHHLFDMTFIEKIKRWLTNIQVKIKAEVANSNSQGQHLSKMISVFNTKLKLIKNPQVDSEKFTASEAYETLIPILKEFRNRVKYLNCAVKKERVAVVIPTTVDTLVKTTLEKQREKAAMRGARNKRLPLQQKSSKLGGKGKKTSNLAQMAQ-LVQGGALSAASK--QVLTATPKTAVASKSPLPPPPSETPSSATNDGGETAPSTPAPPKPTTAGYSMRRNSGVRTSLG-----GKYDKKYLAFGDPSQEPEKPDKHFLALQIKILQSGLDGLLSSAEHYYRQKGTRHPTRPKVINDTFDLCAESVIGRLRKYKTQTESYHNDCIQEFRAQIKLFNGIMIELPSLLMISLITKHQNTRSNAQKDISNTLQSKIEISERLKKEHQTLLRPTLGHPNNKPELDKLKSSEKSRQKESEKSLDDYQKLMLDCINMSVRSFVIELNEKVNTLLSQFDVALTLDEVIIGDPKMKPKAEKELL---RENQKQRKQEESEKQNQQQNLSKNEDQFETPTPHYWPKLD-TSSLIESGILKATDFLTIPNSMKQTEAHKAVIKARDEEFQHFLDNQSLEREELKKSCDVIRNENERWKNNWKTSIKKITQLY 901
            ++FS GGNFSP+E++    RLE+ A++I+  E  +   +E LEN+ L+ A +   K E +F +   D+ FIEKI+R LTN+QVKIK +VA SNSQ   L+  +     K+K  +  + +    T  E    +    ++   R++YLNC++  +RV++    T      T L+ Q E + +  +      L++++       +  + L+++ + L++  A+    K  Q+      T    K P             N G +  PS  A    T+AG     +  +  S        K ++KY   GD   +P    + F  + + +L    + LL+ AE +YR K  R  TRP  + DTFD CAE++  ++ +Y++Q   YHN C+ E R QI+ F  ++ ++  L+M +    H      + K+I    + + +  E+ K ++   L   LGHP +  E++ L  SE+ RQ+E +  +   ++ + +C   + + F+  L       L Q D  +T+D+V +   +M+P  +K  +   R+      +EESEK   ++   K            WP +  T   I++ IL      +  ++ K T  H A ++ARD  +  +L +   E + ++  C     E +RWK++WK S+  I  LY
Sbjct: 1016 QLFSEGGNFSPKEINSLCSRLEKEAARIELVESVIMLNMEKLENEYLDQANDVINKFESKFHNLSVDLIFIEKIQRLLTNLQVKIKCQVAKSNSQTNGLNFSLQQLQNKIKTCQESRGEKTTVTTEELLSFVQTWKEKLSQRIQYLNCSL--DRVSM----TELVFTNTILKDQEEDSDILTSSE---ALEEEAKLDVVTPESFTQLSRVGKPLIEDPAVDVIRKLLQLPNTKWPTHHCDKDPSQTGFKRHRCQPENSGKKAVPSASA----TSAGSLQTTHPPLSHSFTPHPKPNKMERKYRVLGD---KPPPAAEDFKGIILTLLWESSENLLTVAEEFYR-KEKRPVTRPDCMCDTFDQCAENISKKILEYQSQANKYHNSCLIELRIQIRRFEELLPQVCWLVMENFKEHHWKKFFTSVKEIRGQFEEQQKRLEKRKDKNAQKLHLNLGHPVHFQEMESLHLSEEERQEELDSMIRMNKEKLEECTRRNGQVFITNLATFTEKFLLQLDEVVTIDDVQVA--RMEPPKQKLSMLIRRKLAGLSLKEESEKPLIERGSRK------------WPGIKPTEVTIQNKILLQPT--SSISTTKTTLGHLAAVEARDAVYLKYLASFEEELKRIQDDCTSQIKEAQRWKDSWKQSLHTIQGLY 1645

The following BLAST results are available for this feature:

BLAST of TCONS_00036688-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00036688-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CC180	1.208e-53	27.30	Coiled-coil domain-containing protein 180 OS=Homo ...	[more]

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TCONS_00036688-protein (polypeptide) - C. hemisphaerica