TCONS_00036550-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036550-protein
Unique NameTCONS_00036550-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length179

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036550-protein ID=TCONS_00036550-protein|Name=TCONS_00036550-protein|organism=Clytia hemisphaerica|type=polypeptide|length=179bp
AGGKVILEQCLNTVLVSLSLLMAGSGNITILKMARQLRKRTNDVSYGNHM
AIHMAIGFLFLGGGRYTLKTDDIAIASLLCAVYPKWPISSKDNRFHLQAL
RHLYVLACEPRLFVTRDVDNKNICYTPIEVTLKETLNYPESRVKMLSPCF
IPESKYIKKITTLGPRYLSFALTVPKKNK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021560XLOC_021560Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036550TCONS_00036550Clytia hemisphaericatranscript
Blast
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BLAST of TCONS_00036550-protein vs. Swiss-Prot (Human)
Match: APC1 (Anaphase-promoting complex subunit 1 OS=Homo sapiens GN=ANAPC1 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 7.661e-47
Identity = 87/174 (50.00%), Postives = 123/174 (70.69%), Query Frame = 0 
Query:    7 LEQCLNTVLVSLSLLMAGSGNITILKMARQLRKRTN-DVSYGNHMAIHMAIGFLFLGGGRYTLKTDDIAIASLLCAVYPKWPISSKDNRFHLQALRHLYVLACEPRLFVTRDVDNKNICYTPIEVTLKETLNYPESRVKMLSPCFIPESKYIKKITTLGPRYLSFALTVPKKNK 179
            LE CL+ VL+SL+++MAGSGN+ +L++ R L  +T  +++YG H+A HMA+G LFLGGGRY+L T + +IA+LLCA+YP +P  S DNR+HLQALRHLYVLA EPRL V  DVD    CY  +EVT K T  Y +++ ++++P  +PE   +K+I   GPRY    + + K  +
Sbjct: 1512 LETCLSVVLLSLAMVMAGSGNLKVLQLCRFLHMKTGGEMNYGFHLAHHMALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLLVPVDVDTNTPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPRYWELLIDLSKGTQ 1685
The following BLAST results are available for this feature:
BLAST of TCONS_00036550-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
APC17.661e-4750.00Anaphase-promoting complex subunit 1 OS=Homo sapie... [more]
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