TCONS_00036488-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036488-protein
Unique NameTCONS_00036488-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length296

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036488-protein ID=TCONS_00036488-protein|Name=TCONS_00036488-protein|organism=Clytia hemisphaerica|type=polypeptide|length=296bp
GDLAVDCDPKKCSSKTCRCPSNVPPSSINSKDVPKFVLLTMDDDMSNSKY
NAMRDILGQRTNPNGCPIKATFFLSTLGGLGEIRKLQSLGHEIACHTESH
RNSQSYWKRSKYQTYKREIVDYRDKLSKAGIKEVRGYRQPYLQTGGDTTY
KVLHDHDFLYDSSLPTALNEGLWPYTLDYKIHKCVIPPCPKGSYDGLWQV
PIEIYQNQITGHKCSLFDEPYCWYNLLTEDQTYDYFMANFERHFSEGRTS
PFPMAGHLLNLLNGVNKTRREGMIRFMDTLLKKDDVYFVTMTELIR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021511XLOC_021511Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036488TCONS_00036488Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002509NODB_dom
IPR011330Glyco_hydro/deAcase_b/a-brl
Vocabulary: Molecular Function
TermDefinition
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002509NodB homology domainPFAMPF01522Polysacc_deac_1coord: 33..160
e-value: 2.9E-12
score: 46.5
NoneNo IPR availableGENE3D3.20.20.370coord: 19..296
e-value: 2.0E-40
score: 138.3
IPR011330Glycoside hydrolase/deacetylase, beta/alpha-barrelSUPERFAMILY88713Glycoside hydrolase/deacetylasecoord: 7..295

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036488-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top