TCONS_00036485-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036485-protein
Unique NameTCONS_00036485-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1050

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036485-protein ID=TCONS_00036485-protein|Name=TCONS_00036485-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1050bp
QLTTEKKDNRFKIGKFDRNFCINYLDGYYSHPNECDLYYRCVTSVAHFGQ
CPEDTFFHEAINGCVRRENAKCTKTSEPDATTQQPTTPEASSPEDTTAET
TVPTTLSTEDTTETTQPKTEDNTQSTEEEVTKLATSPQTTESITLESSTQ
EPSQATIQATEPTTEATTQTTLEPVSTKGGETTQSSTQTSSTSESVTSNP
TTLAETTETTQQTTKPASTVSETTTHQATQSTTEQVVQSTTETEATKPAT
QPDTTAEQTQPTTVAATERTKERKTIDEDFCRTNQLTTGWHAIEFDCTKY
YQCVQGRTFVRMCAKNTFFHPKFFCVSKERAMCTKIPESENSATTETVKT
PESTTQSTEGTIQATESTTQSTESTTQSTGSTTQATESTTQATESTTQST
ESTTQATESTTQATESTTQATESTTQSTEGTTQSTESTTQATESTTQSTE
GATQSTESTTQATESTTQSTEGTTQSTESTTQAAESTTQATEGTTQVTES
TTQATESTTQATESTTQATESTTQATESTTQATESTTQATEGTTQSTEGT
TQSTESTTQATESTTQSTESTTQEVQTTKQAITIGETIIDKDFCLNHEDG
FHPNPSDCRELYQCLRKRTFPRSCSSGLLYDSIAVRCKDADLVNCELNRN
GVIPKTTQAPPPAEATEAPKTKNTPEPTHNEFFCEDNNLDPGFYPDPKDC
KSFYRCFKQAGQLKTKFTVCTGTLLYDSVNIRCEWPNVVDCNLNKGLTTT
PVPLPAYAGQYPIATACNKATCTLKNKCKCAGTDAPHPKLTATTSPKIVI
FSMDDSLGSSQYNVISEILDGRVNPNGCPVTGTMFVSMDSVQSLRYPKLM
YDKGHEIAVHTKSHRFPTTYWKTVSYKALVDEIVDLRDQMFKAGIKNVVG
YRNPFLQTSGDTLFTLLKDFNFRYDSSLPTPAHAYWWPYTMEHKVDYCAI
PPCPTKSYKGFYEVPLEIVKNRKGGLCSMFDEPGCWRNSLQTADETYDYF
KENFERHFTHGSSPFPIHGHANNLLGGSHGPRKEGLIRFLDELMRREDVY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021508XLOC_021508Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036485TCONS_00036485Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
IPR011330Glyco_hydro/deAcase_b/a-brl
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0003824 catalytic activity
molecular_function GO:0008061 chitin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002557Chitin binding domainSMARTSM00494chi_10coord: 682..743
e-value: 5.1E-8
score: 42.6
coord: 592..647
e-value: 2.3E-8
score: 43.8
coord: 279..335
e-value: 1.0E-6
score: 38.3
coord: 19..74
e-value: 6.7E-12
score: 55.5
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 584..651
e-value: 1.5E-10
score: 40.3
coord: 672..751
e-value: 3.2E-10
score: 39.2
coord: 270..338
e-value: 2.3E-7
score: 30.1
coord: 12..85
e-value: 1.7E-13
score: 49.7
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 684..741
e-value: 8.0E-6
score: 25.8
coord: 594..645
e-value: 5.0E-8
score: 32.9
coord: 21..72
e-value: 1.8E-9
score: 37.5
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 681..743
score: 11.401
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 278..335
score: 10.501
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 591..647
score: 11.883
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 18..74
score: 12.708
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 680..749
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 282..337
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 19..81
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 590..647
NoneNo IPR availableGENE3D3.20.20.370coord: 785..1050
e-value: 3.6E-30
score: 104.7
NoneNo IPR availableGENE3D1.20.120.570coord: 339..512
e-value: 3.8E-5
score: 22.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 653..678
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..579
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 420..580
IPR011330Glycoside hydrolase/deacetylase, beta/alpha-barrelSUPERFAMILY88713Glycoside hydrolase/deacetylasecoord: 780..1050

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036485-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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