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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00036467-protein ID=TCONS_00036467-protein|Name=TCONS_00036467-protein|organism=Clytia hemisphaerica|type=polypeptide|length=961bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00036467-protein vs. Swiss-Prot (Human)
Match: NPC1 (Niemann-Pick C1 protein OS=Homo sapiens GN=NPC1 PE=1 SV=2) HSP 1 Score: 248.825 bits (634), Expect = 3.129e-68 Identity = 243/970 (25.05%), Postives = 424/970 (43.71%), Query Frame = 0
Query: 45 LEKVFTNLGYIITKRPNLTIILGVLISLALIGGFARYNLIKRAEDLYLPKNSEASKDLDRVEENFPMSFKSESFIIR------------PKDANAPL---LTEEIFKEALEIHHEIMNIPGLTDVCIMNERLNTCAV-LSPLEFFNFNIS--NIQNVSQRLHQVLNDSKVLSSDGRQAYTNFPYYFSYFETTLTTQGMQIVRADALKTDYFVKDPSSKGIYGK-------LESFEDK----------------YVDIMSRKER-------------ELDNKGLILLYNFGRSIDISVSDSTQKDIILVPVALLLMVIFCGLSLARFRN--RIL--GHFNLALAGVLMLFLAIASAFCFIMLIGAPY-IAFAGVLPFLVLGVGIDDIFIIIDSVDRQHPSIKSNT---RIAKALGEVCASITMTTLTDLVAFFVSMVTDFPAIRYFCMYAAFSITFCYILVITVFVALLSFDVKRIEAGQFDVIPCVANNKETTEEVWEEAGESMINKLI-TKYAEVLMLKPIKAIVIIISIGMTAFGIYGAINVDQSFNQLVLGLKGSAYVKYFGYFETGFPSGIPVNVVLDAPLNYTDSSLQQQYSNLSQIAIDNNYMESQTFNWMRDLLSWSKNENITASGRHFYPSLYLFLQENQHYLVDIKFHKNWLQDMLEWSVVRQKLVTVDNFYQNLEQFL-------------------METPQISAYMKY--NFTTDSFLLRSNT------KETFKTCDGECFLIKASRFIILTKANHFSIYRRDAMLSLREDLRTKTD-LPVYGVSYN-------YIYVEQFVVILPDTIRNLAICASAILLITLPYLVDPKVTFFVFSGFVCL-MFELFGVMYLWDVSLNAISMIIIVMGIGFSVDYSAHIAHAFVICNEKTSERRVIYAMRTMGASVTMG-GISTFVGVVTTAFAQSELFKIF-FKMVFGIVVLGLIHGLVFLPVFLA 913
L ++FT G + P I ++ A G + DL+ +S+A + + +++F F++E IIR P A+ P L +I + L++ I NI D NE + + L+PL +N N + ++ N Q H VL+ K D Y ++ +F Y VRA A D + G +G L ++D+ Y + + +R N L + + RSI+ ++ + D+ V ++ +M ++ L+L ++ R+L +L +AG+L++ ++A + IG P + V+PFLVL VG+D+IFI++ + R ++ T ++ + LGEV S+ +++ ++ VAFF+ ++ PA+ F ++A ++ ++L IT FV+LL D+KR E + D+ CV ++ T +A ES + + Y+ +L+ ++ IVI I +G+ +F I VD +Q + S V YF +G PV VL+ +YT S Q + +N+ + Q FN ++ +N T G F PS +W+ D +W + VDN +QF + PQ +M++ F +D+ + G + A+ F+ S DA+ R T+ + + G +Y Y++ EQ++ I+ DTI NL + AI L+T+ L + + + + + +FGVM+LW +SLNA+S++ +VM G SV++ +HI AF + + + R A+ MG+SV G ++ F G+V AFA+S++F+IF F+M +V+LG HGL+FLPV L+
Sbjct: 335 LRRLFTRWGSFCVRNPGCVIFFSLVFITACSSGLVFVRVTTNPVDLWSAPSSQARLEKEYFDQHFGPFFRTEQLIIRAPLTDKHIYQPYPSGADVPFGPPLDIQILHQVLDLQIAIENITASYD----NETVTLQDICLAPLSPYNTNCTILSVLNYFQNSHSVLDHKK---GDDFFVYADYHTHFLY-----------CVRAPASLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAWEKEFINFVKNYKNPNLTISFTAERSIEDELNRESDSDVFTVVISYAIMFLYISLALGHMKSCRRLLVDSKVSLGIAGILIVLSSVACSLGVFSYIGLPLTLIVIEVIPFLVLAVGVDNIFILVQAYQRDE-RLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSLFAGLAVFIDFLLQITCFVSLLGLDIKRQEKNRLDIFCCVRGAEDGTSV---QASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQSLSMPDDSYMVDYFKSISQYLHAGPPVYFVLEEGHDYTSSKGQNMVCG--GMGCNNDSLVQQIFNA-------AQLDNYTRIG--FAPS-------------------SWIDDYFDWVKPQSSCCRVDNI---TDQFCNASVVDPACVRCRPLTPEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILLGHGTRVGATYFMTYHTVLQTSADFIDALKKARLIASNVTETMGINGSAYRVFPYSVFYVFYEQYLTIIDDTIFNLGVSLGAIFLVTMVLLGCELWSAVIMCATIAMVLVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSMKGSRVERAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLPVLLS 1249 The following BLAST results are available for this feature:
BLAST of TCONS_00036467-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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