TCONS_00036366-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036366-protein
Unique NameTCONS_00036366-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length636

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036366-protein ID=TCONS_00036366-protein|Name=TCONS_00036366-protein|organism=Clytia hemisphaerica|type=polypeptide|length=636bp
MSEQLKYIVDGLNDVPYNKNLNLISFDSLQPIQLLQILNDVMTNINPQQA
SDVRDEDPESRVMRMLQFLRVMKYKPKTDGGNVSAFRQGIVQGDKPVIYP
ILQWLLEQGAELKQRAYLARFLVKLDIPGEVLIDNEVSENHQLYLNLIED
FKEVHKESEQIKGSGMSAAEIKKDILSMEEEQEQLRKRIDRVKKRVDPVA
NKDNLLYAAKQLRQERERESNLADQQHAQKTSLSHAEQKINRMQMQIRDF
KASSIGITPDGLIKRLEEENQVNVYLTTEKIPKELENKKQYIDTLQRVSD
EPAMGQNELEVLNQSIKELSSEVNELVEKRMMRNDPIDDKLSVFRQQAAV
IANKKKSAAEDLQEAMDEYHNAEGEIEERKDKLKDSDDVQMLKGDEFKRY
VNKLRGISNIYKKKRQEISDLQAEVGVLSRSEEILKSRDDNSQAFLSNLE
AKHGVSGFHDAQEELEKVSTMKGELDEKKGKTLEEMSQLVVQLTNSISEK
KNSLAPVIKELRPLRQQAQELSVEYEERKGTYETTAAGLESNMSKLDQEV
KALREEVLAEESRYHYMESMIEVLEVQQQRIDEEIKSYVNTDSSKKSLRD
KYSQRIHEQEVLGKQLREKQKYLRENHAPNMRQMKM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021411XLOC_021411Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036366TCONS_00036366Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 352..382
NoneNo IPR availableCOILSCoilCoilcoord: 168..195
NoneNo IPR availableCOILSCoilCoilcoord: 536..563
NoneNo IPR availableCOILSCoilCoilcoord: 404..424
NoneNo IPR availableCOILSCoilCoilcoord: 233..253
NoneNo IPR availableCOILSCoilCoilcoord: 209..229
NoneNo IPR availableCOILSCoilCoilcoord: 309..329
NoneNo IPR availableGENE3D1.10.486.10coord: 23..299
e-value: 0.016
score: 15.2
NoneNo IPR availableGENE3D1.20.120.330coord: 494..628
e-value: 0.048
score: 12.8
coord: 300..493
e-value: 0.071
score: 12.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..236

Blast
[Close]
BLAST of TCONS_00036366-protein vs. Swiss-Prot (Human)
Match: IFT81 (Intraflagellar transport protein 81 homolog OS=Homo sapiens GN=IFT81 PE=1 SV=1)

HSP 1 Score: 672.544 bits (1734), Expect = 0.000e+0
Identity = 334/638 (52.35%), Postives = 479/638 (75.08%), Query Frame = 0 
Query:    1 MSEQLKYIVDGLNDVPYNKNLNLISFDSLQPIQLLQILNDVMTNINPQQASDVRDEDPESRVMRMLQFLRVMKYKPKTDGGNVSAFRQGIVQGDKPVIYPILQWLLEQGAELKQRAYLARFLVKLDIPGEVLIDNEVSENHQLYLNLIEDFKEVHKESEQIKGSGMSAAEIKKDILSMEEEQEQLRKRIDRVKKRVDPVANKDNLLYAAKQLRQERERESNLADQQHAQKTSLSHAEQKINRMQMQIRDFKASSIGITPDGLIKRLEEENQVNVYLTTEKIPKELENKKQYIDTLQRVSDEPAMGQNELEVLNQSIKELSSEVNELVEKRMMRNDPIDDKLSVFRQQAAVIANKKKSAAEDLQEAMDEYHNAEGEIEERKDKLKDSDDVQMLKGDEFKRYVNKLRGISNIYKKKRQEISDLQAEVGVLSRSEEILKSRDDNSQAFLSNLEAKHGVSGFHDAQEELEKVSTMKGELDEKKGKTLEEMSQLVVQLTNSISEKKNSLAPVIKELRPLRQQAQELSVEYEERKGTYETTAAGLESNMSKLDQEVKALREEVLAEESRYHYMESMIEVLEVQQQRIDEEIKSYVNTDS--SKKSLRDKYSQRIHEQEVLGKQLREKQKYLRENHAPNMRQMKM 636
            MS+Q+K+I+D LN  P+ KN NLI+FDSL+P+QLLQ+L+DV+  I+P+Q  D+R+E PE    RML  L ++KYKP  +  ++S FRQG+V G KPVIYP+L WLL++  ELK+RAYLARFL+KL++P E L D  V++ ++ Y  L+E FK +HKE EQ+K SG S AEI+KDI +MEEE++QL KR++ +KKRV+   N   +L  A+QLR E+ERE  LA Q+  QK  L HA Q++ R+Q Q++  + ++    P+ L+KRLEEE + N+Y+ TEK PKELENKK+ +  LQ+V  EPAMG ++L  L   I E+++E+N+L+EK+MMRN+PI+ KLS++RQQA++I+ KK++ AE+LQEA ++  + E E   ++++ ++ D  ++LKGDEFKRYVNKLR  S ++KKK Q I++L+AE G+L R+EE+LK R +N Q  L  +E K G+SG+   QEELE+VS +K E+DE KG+TL++MS++V +L + +SEKK++LA VIKELR LRQ+ QEL+ E +E+K  Y++ AAGLESN SKL+QEV+ LREE L EESRYHY   MI+ LEVQ +R  +E+K+Y+++D    +K++R++Y++   EQE LGK+LREKQK +RE+H PNM+Q KM
Sbjct:    1 MSDQIKFIMDSLNKEPFRKNYNLITFDSLEPMQLLQVLSDVLAEIDPKQLVDIREEMPEQTAKRMLSLLGILKYKPSGNATDMSTFRQGLVIGSKPVIYPVLHWLLQRTNELKKRAYLARFLIKLEVPSEFLQDETVADTNKQYEELMEAFKTLHKEYEQLKISGFSTAEIRKDISAMEEEKDQLIKRVEHLKKRVETAQNHQWMLKIARQLRVEKEREEYLAQQKQEQKNQLFHAVQRLQRVQNQLKSMRQAAADAKPESLMKRLEEEIKFNLYMVTEKFPKELENKKKELHFLQKVVSEPAMGHSDLLELESKINEINTEINQLIEKKMMRNEPIEGKLSLYRQQASIISRKKEAKAEELQEAKEKLASLEREASVKRNQTREFDGTEVLKGDEFKRYVNKLRSKSTVFKKKHQIIAELKAEFGLLQRTEELLKQRHENIQQQLQTMEEKKGISGYSYTQEELERVSALKSEVDEMKGRTLDDMSEMVKKLYSLVSEKKSALASVIKELRQLRQKYQELTQECDEKKSQYDSCAAGLESNRSKLEQEVRRLREECLQEESRYHYTNCMIKNLEVQLRRATDEMKAYISSDQQEKRKAIREQYTKNTAEQENLGKKLREKQKVIRESHGPNMKQAKM 638
The following BLAST results are available for this feature:
BLAST of TCONS_00036366-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IFT810.000e+052.35Intraflagellar transport protein 81 homolog OS=Hom... [more]
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