TCONS_00036167-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036167-protein
Unique NameTCONS_00036167-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1019

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036167-protein ID=TCONS_00036167-protein|Name=TCONS_00036167-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1019bp
MFKCGSIFSFRKRWGRWQPRHLEYLDKSHCSLTLVGEDVLSHERTLEELS
LEANQIQDLPKALFRMYKLRRLILADNEILDISSEIGNLISLEELDISKN
DFRIIPDSIEKLKNLTHLDVSNNTLGEVPDAITKLGELRTWVCNDIALGE
IPPEVGSLSNLVILELRDNCLKFLPMSFSFLSTLERLDLGGNELEELPDF
IGQLSSLIELWLDNNFLTTLPPEIGELRNLQCLDVSENRVDELPEEIYGL
QSLTDLILSSNVLHELPEGIGKLSHLQILKLDSNEIDELTEKVGNCTEMS
ELILTDNVIEYLPSAIGRMTKLTHMNIDRNRLFTLPPEIGKCVHLSVLSA
RDNQIAKIPDEIGNCKSMTVLALSGNKLENLPLSISTLHLKALWLSQNQS
QSVLKLQVEEIEKTQERVLTCFLFPQERLKAASLEDFIKETDGEGDDGKV
WKSFSPSAVTFGGNNDDENKESNLQRRGTPYPKDLRDRHPHLIRKRSGSQ
DSEHSHHSHHNEHERNESRGEADPLSPNHESKKKGGISFGESPIVIKSAP
GGGIGGMVNPAAVFDNPAANFDAESEEHDNTSDHDYENSDTEGRRRVGFD
FVEDEHVPERDTRFDVEDDDVCRLTRKDTPHHLKGKRIGKNDDDSQLQNI
LQTIRQRSVEEAENNTTPDDEETPVAEQSEDTMDGPTVEQIEDKKKGVQK
YTRKDTPRPADFAKKPFEPQHDPSHIFAEEEEEDEEDDDSDKSSDSSDKE
DEEGDEQRADGEETTRTITKVYEEISVTVERDGLSLGINIAGGLGTTTFD
QDEELSTDFEKKFDDEGVYISKITSNGPADRSGALNVGDKIIKVNEQDLS
MIEHSEAVKILRVATSPVSIVVLREVTDQDQIDIALSNEKNVRFAAEPEV
EDIEIEAQTIPVMLKRDGKGLGFSIAGGKGATPYRGTDEGVYISRISENG
PAALDKRLQVGDKLLSINGVDVRHSKHEDIVKILTSSTDKVSLVAYREKV
INKKMRPMSEINGGSIXYQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021273XLOC_021273Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036167TCONS_00036167Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001478PDZ
IPR032675L_dom-like
IPR001611Leu-rich_rpt
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..59
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 342..361
e-value: 420.0
score: 1.3
coord: 227..246
e-value: 160.0
score: 4.5
coord: 273..292
e-value: 420.0
score: 1.3
coord: 181..200
e-value: 0.62
score: 19.1
coord: 45..62
e-value: 460.0
score: 1.0
coord: 204..223
e-value: 120.0
score: 5.4
coord: 250..269
e-value: 64.0
score: 7.5
coord: 365..384
e-value: 360.0
score: 1.8
coord: 89..108
e-value: 220.0
score: 3.5
coord: 112..131
e-value: 18.0
score: 11.7
NoneNo IPR availableGENE3D2.30.42.10coord: 885..1000
e-value: 2.7E-25
score: 88.2
NoneNo IPR availableGENE3D2.30.42.10coord: 763..879
e-value: 5.8E-20
score: 70.7
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 774..873
e-value: 4.03989E-15
score: 71.4438
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 915..994
e-value: 1.8559E-19
score: 83.7702
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 343..365
e-value: 130.0
score: 4.1
coord: 181..203
e-value: 9.8
score: 13.3
coord: 250..272
e-value: 6.8
score: 14.6
coord: 89..111
e-value: 21.0
score: 10.6
coord: 112..135
e-value: 2.6
score: 17.0
coord: 158..180
e-value: 22.0
score: 10.5
coord: 319..342
e-value: 1.6
score: 17.7
coord: 273..296
e-value: 1.8
score: 17.6
coord: 40..66
e-value: 14.0
score: 12.1
coord: 204..225
e-value: 3.0
score: 16.8
coord: 366..388
e-value: 180.0
score: 3.0
coord: 227..249
e-value: 8.4
score: 13.9
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 784..876
e-value: 4.5E-19
score: 79.4
coord: 919..999
e-value: 6.6E-22
score: 88.8
IPR001478PDZ domainPFAMPF00595PDZcoord: 781..872
e-value: 6.2E-15
score: 55.2
coord: 914..994
e-value: 1.8E-18
score: 66.6
IPR001478PDZ domainPROSITEPS50106PDZcoord: 774..876
score: 19.441
IPR001478PDZ domainPROSITEPS50106PDZcoord: 911..999
score: 22.214
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 906..998
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 767..878
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 284..762
e-value: 5.4E-29
score: 100.2
coord: 15..114
e-value: 2.5E-24
score: 84.8
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 234..283
e-value: 1.7E-12
score: 46.5
coord: 185..233
e-value: 2.3E-16
score: 59.1
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 115..184
e-value: 3.0E-18
score: 65.0
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 17..197
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 138..403
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 68..125
e-value: 1.9E-8
score: 33.8
coord: 206..263
e-value: 2.1E-7
score: 30.5
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 344..365
score: 6.526
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 91..112
score: 6.287
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 275..296
score: 6.072
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 367..388
score: 5.956
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 389..410
score: 5.864
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 45..66
score: 6.788
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 183..204
score: 7.62
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 68..89
score: 6.78
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 321..342
score: 5.54
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 114..135
score: 6.849
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 229..250
score: 6.549
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 252..273
score: 6.141
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 206..227
score: 7.034
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 160..182
score: 6.041

Blast
[Close]
BLAST of TCONS_00036167-protein vs. Swiss-Prot (Human)
Match: SCRIB (Protein scribble homolog OS=Homo sapiens GN=SCRIB PE=1 SV=4)

HSP 1 Score: 447.203 bits (1149), Expect = 6.605e-136
Identity = 277/683 (40.56%), Postives = 393/683 (57.54%), Query Frame = 0 
Query:    1 MFKCGSIFSFRKRWGRWQPRHLEYLDKSHCSLTLVGEDVLSHERTLEELSLEANQIQDLPKALFRMYKLRRLILADNEILDISSEIGNLISLEELDISKNDFRIIPDSIEKLKNLTHLDVSNNTLGEVPDAITKLGELRTWVCNDIALGEIPPEVGSLSNLVILELRDNCLKFLPMSFSFLSTLERLDLGGNELEELPDFIGQLSSLIELWLDNNFLTTLPPEIGELRNLQCLDVSENRVDELPEEIYGLQSLTDLILSSNVLHELPEGIGKLSHLQILKLDSNEIDELTEKVGNCTEMSELILTDNVIEYLPSAIGRMTKLTHMNIDRNRLFTLPPEIGKCVHLSVLSARDNQIAKIPDEIGNCKSMTVLALSGNKLENLPLSISTLHLKALWLSQNQSQSVLKLQVEEIEKTQERVLTCFLFPQERLKAASLEDFIKETDGEGDDGKVWKSFSPSAVTF----------GGNNDDENKESNLQRRGTPYPKDLRDRHPHLIRKRSGSQDSEHSHHSHHNEHERNES----RGEADPLSPNHESKKKGGISFGESPIVIKSAPGGGIGGMVNPAAVFDNPAANFDAESEEHDNT------SDHDYENSDTEGRRRVGFDFVEDEHVPERDTRFDVEDDDVC--------RLTRKDTPHHLKGKRIGKNDDDSQLQNILQTIR 655
            M KC  ++           RH+E +DK HCSL  V E++  + R+LEEL L+ANQ+++LPK  FR+  LR+L L+DNEI  +  E+ N + L ELD+S+ND   IP+SI+  K L   D S N L  +PD  T+L  L     ND++L  +P +VG+L+NLV LELR+N LK LP S SFL  LE+LDLGGN+LE LPD +G L +L ELWLD N L+ LPPE+G LR L CLDVSENR++ELP E+ GL  LTDL+LS N+L  LP+GIG+L  L ILK+D N + E+TE +G+C  +SELILT+N++  LP ++G++TKLT++N+DRN L  LPPEIG CV LSVLS RDN++A +P E+ +   + VL ++GN+L++LP +++ L+LKALWL++NQ+Q +L+ Q E+  +T E+VLTC+L PQ+     SLED  +    +G   + W    PS V+               +   ++  LQRR TP+P +L+      + KRS              E  R+E+         PL P  E K+       ES +   S P         P    + P+A     S++   T      ++ DY+             F ED  +P  D   +    +          RL RKDTPH+ K  +I K      +  +LQ ++
Sbjct:    1 MLKCIPLWRCN--------RHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPFALTHLNLKALWLAENQAQPMLRFQTEDDARTGEKVLTCYLLPQQ--PPPSLEDAGQ----QGSLSETWSDAPPSRVSVIQFLEAPIGDEDAEEAAAEKRGLQRRATPHPSELK------VMKRS-------------IEGRRSEACPCQPDSGSPL-PAEEEKRLS----AESGLSEDSRPSASTVSEAEP----EGPSAEAQGGSQQEATTAGGEEDAEEDYQEPTVH--------FAEDALLPGDDREIEEGQPEAPWTLPGGRQRLIRKDTPHYKKHFKISKLPQPEAVVALLQGMQ 633

HSP 2 Score: 157.918 bits (398), Expect = 5.540e-39
Identity = 91/239 (38.08%), Postives = 139/239 (58.16%), Query Frame = 0 
Query:  773 EEISVTVERDGLSLGINIAGGLGTTTFDQDEELSTDFEKKFDDEGVYISKITSNGPADRSGALNVGDKIIKVNEQDLSMIEHSEAVKILRVATSPVSIVVLREVTDQDQIDIALSNEK-------------NVRFAAEPEVEDIEIEAQTIPVMLKRDGKGLGFSIAGGKGATPYRGTDEGVYISRISENGPAALDKRLQVGDKLLSINGVDVRHSKHEDIVKILTSSTDKVSLVAYRE 998
            EE+++T+ R    LGI+IAGG G+T +            K DDEG++IS+++  GPA R+G + VGDK+++VN   L   EH EAV+ LR A + V + V RE   + +  + ++  +              +R    P      +  + +   L R  +GLGFSIAGGKG+TPYR  D G+++SRI+E G A     LQVGD++LSINGVDV  ++H+  V +LT+++  ++L+  RE
Sbjct:  725 EELTLTILRQTGGLGISIAGGKGSTPY------------KGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGGGLRLPLLPPESPGPLRQRHV-ACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAASPTIALLLERE 949

HSP 3 Score: 95.5153 bits (236), Expect = 8.317e-20
Identity = 45/102 (44.12%), Postives = 70/102 (68.63%), Query Frame = 0 
Query:  900 VEDIEIEAQTIPVMLKRDGKGLGFSIAGGKGATPYRGTDEGVYISRISENGPAALDKRLQVGDKLLSINGVDVRHSKHEDIVKILTSSTDKVSLVAYREKVI 1001
            +E   IE + + + + R   GLG SIAGGKG+TPY+G DEG++ISR+SE GPAA    ++VGDKLL +NGV ++ ++H + V+ L  +   V +  +RE+++
Sbjct:  717 IEPARIEEEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAA-RAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRERMV 817

HSP 4 Score: 87.8113 bits (216), Expect = 1.898e-17
Identity = 71/226 (31.42%), Postives = 106/226 (46.90%), Query Frame = 0 
Query:  772 YEEISVTVERDGLSLGINIAGGLGTTTFDQDEELSTDFEKKFDDEGVYISKITSNGPADRSGALNVGDKIIKVNEQDLSMIEHSEAVKILRVATSPVSIVVLREVTDQDQIDIALSNEKNVRFAAEPEVEDIEIEAQTIPVMLKRDGKGLGFSIAGGK---GATPYRGTDEGVYISRISENGPAALDKRLQVGDKLLSINGVDVRHSKHEDIVKILTSSTDKVSLV 994
            Y    + + R G  LG++I GG         +  S  F     + GV+ISK+   G A RSG L VGD+I+ VN QD+    H EAV  L      +S++V R+                    A P + ++ I+        K  G+ LG SI GG       P   TDEG++IS++S  G A  D RL+VG +LL +N   +    H + V++L S  D ++++
Sbjct: 1000 YPVEEIRLPRAGGPLGLSIVGG--------SDHSSHPF--GVQEPGVFISKVLPRGLAARSG-LRVGDRILAVNGQDVRDATHQEAVSALLRPCLELSLLVRRD-------------------PAPPGLRELCIQ--------KAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVL 1187
The following BLAST results are available for this feature:
BLAST of TCONS_00036167-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SCRIB6.605e-13640.56Protein scribble homolog OS=Homo sapiens GN=SCRIB ... [more]
back to top