TCONS_00036084-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036084-protein
Unique NameTCONS_00036084-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length277

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036084-protein ID=TCONS_00036084-protein|Name=TCONS_00036084-protein|organism=Clytia hemisphaerica|type=polypeptide|length=277bp
MGALLSVLIIWVLTGILVYEAIMRAKDQNFEINPIIMLITSGVGVCVNII
MGVTLHGSGHGHSHGLGGGHSHGNSHSHSHSSPHADNVENGTPASAGSST
SSGENEELIKRSKSKLKKDLNVRAAFIHVLGDLVQSVGVFLAALVIYFKP
TWKIADPICTFLFSILVLFTTLTILKDIVVVLMEGTPKGLDFKEVMEDLE
NIRAVRMVHNLHIWSLTMGTAALSVHLAIDDTRSTHSVLREAQVLIAKKY
EIYHSTIQVEKFHDQMENCSMCEEPKD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021214XLOC_021214Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036084TCONS_00036084Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027470Cation_efflux_CTD
IPR002524Cation_efflux
Vocabulary: Molecular Function
TermDefinition
GO:0008324cation transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006812cation transport
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006812 cation transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008324 cation transmembrane transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1510.10coord: 1..183
e-value: 2.0E-29
score: 102.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..108
NoneNo IPR availableSUPERFAMILY161111Cation efflux protein transmembrane domain-likecoord: 115..184
coord: 2..59
NoneNo IPR availableSUPERFAMILY160240Cation efflux protein cytoplasmic domain-likecoord: 190..260
IPR027470Cation efflux protein, cytoplasmic domainGENE3D3.30.70.1350coord: 187..263
e-value: 1.0E-10
score: 41.3
IPR002524Cation efflux proteinPFAMPF01545Cation_effluxcoord: 1..183
e-value: 1.5E-23
score: 83.5
IPR002524Cation efflux proteinTIGRFAMTIGR01297TIGR01297coord: 2..262
e-value: 3.8E-58
score: 195.0

Blast
[Close]
BLAST of TCONS_00036084-protein vs. Swiss-Prot (Human)
Match: ZNT2 (Zinc transporter 2 OS=Homo sapiens GN=SLC30A2 PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 3.392e-77
Identity = 124/277 (44.77%), Postives = 170/277 (61.37%), Query Frame = 0 
Query:    1 MGALLSVLIIWVLTGILVYEAIMRAKDQNFEINPIIMLITSGVGVCVNIIMGVTLHGSGHGHSHGLGGGHSHGNSHSHSHSSPHADNVENGTPASAGSSTSSGENEELIKRSKSKLKKDLNVRAAFIHVLGDLVQSVGVFLAALVIYFKPTWKIADPICTFLFSILVLFTTLTILKDIVVVLMEGTPKGLDFKEVMEDLENIRAVRMVHNLHIWSLTMGTAALSVHLAIDDTRSTHSVLREAQVLIAKKYEIYHSTIQVEKFHDQMENCSMCEEPKD 277
            +GAL+SVL IWV+TG+LVY A+ R    ++EI+   MLITSG  V VNIIMG+TLH SGHGHSHG                                   ++ + EE           + +VRAAFIHV+GD +QS+GV +AA ++YFKP +K  DPICTF+FSILVL TTLTIL+D+++VLMEGTPKG+DF  V + L ++  V  +H+LHIW+LT+    LSVH+AI       +VL+ A   +  K+  +  TIQ+E + + M++C  C+ P D
Sbjct:   93 LGALVSVLSIWVVTGVLVYLAVERLISGDYEIDGGTMLITSGCAVAVNIIMGLTLHQSGHGHSHG-----------------------------------TTNQQEE-----------NPSVRAAFIHVIGDFMQSMGVLVAAYILYFKPEYKYVDPICTFVFSILVLGTTLTILRDVILVLMEGTPKGVDFTAVRDLLLSVEGVEALHSLHIWALTVAQPVLSVHIAIAQNTDAQAVLKTASSRLQGKFHFHTVTIQIEDYSEDMKDCQACQGPSD 323
The following BLAST results are available for this feature:
BLAST of TCONS_00036084-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZNT23.392e-7744.77Zinc transporter 2 OS=Homo sapiens GN=SLC30A2 PE=1... [more]
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