TCONS_00035628-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00035628-protein
Unique Name	TCONS_00035628-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	732

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00035628-protein ID=TCONS_00035628-protein|Name=TCONS_00035628-protein|organism=Clytia hemisphaerica|type=polypeptide|length=732bp
MASGKGKQSLEPISTTSIEDSDTDSDAGANLRSPKDKARREKIIDNWKHI
AHKTKPLTSVMSMYTSTFQSTLDHFSSSNDAFDSNFEFAHAQDQTTLFNF
PQKPIEKQALLQEEVEIEQRANRKRKETVADTQSFDGDSKHRCTEDLNFD
LARKLTPCFQRINVGEQGAAGVPVDELNQAAQLLCEALYIRAKYMALSLQ
SFNSTTASSLENVNDEYKLDKMYNKLAEDAVTTPRPTCVLEQGNPNLNCD
GSVWKPFECDIPGDIGYNVELVDGVFQVLSCKKPVDGDSPNKKSTLHPYP
CIEEFMEDQKFLLALSTHGPVKSFTFRRLQYLHSKFKLHCLLNEMKELAS
QKEIPHRDFYNVRKVDTHIHASSAMNQKHLLRFIKKKVKKHGDDVVEMKD
GKPVTLSQVFDELNLNVYDLSVDKLDVHADGSLFHRFDKFNAKYNPIGKS
KVREIFMKTDNYMGGRYFAELIKEVIEDLEESKYQNAELRISIYGRKKSE
WDSLAKWVIKHDISSYNVRWLIQIPRLYDIYFANKQVESFEEIIDNIFRP
LFEATINPSSHPEMHQFLRQVIGFDSVDDESKPEPFSFSKHSPKPKNWKK
EHNPPYAYYLYYMYSNLVVLNHLRRERGFNIFQLRPHCGEAGPVHHVVTG
FMLAENISHGLLLRKVPAMQYLYYLAQIGVAMSPLSNNSLFLNYHRNPLQ
DFFQRGLLISISTDDPLQFHFTKVTKRSQFEI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_020867	XLOC_020867	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00035628	TCONS_00035628	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001365	A/AMP_deaminase_dom
IPR006329	AMPD
IPR006650	A/AMP_deam_AS
IPR032466	Metal_Hydrolase

Vocabulary: **Molecular Function**
Term	Definition
GO:0019239	deaminase activity
GO:0003876	AMP deaminase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0032264	IMP salvage
GO:0009168	purine ribonucleoside monophosphate biosynthetic process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032264	IMP salvage
biological_process	GO:0009168	purine ribonucleoside monophosphate biosynthetic process
molecular_function	GO:0003876	AMP deaminase activity
molecular_function	GO:0019239	deaminase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 107..127
None	No IPR available	GENE3D	3.20.20.140		coord: 319..725 e-value: 6.4E-91 score: 304.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
IPR001365	Adenosine/AMP deaminase domain	PFAM	PF00962	A_deaminase	coord: 361..722 e-value: 7.1E-99 score: 331.1
IPR006329	AMP deaminase	TIGRFAM	TIGR01429	TIGR01429	coord: 175..725 e-value: 3.4E-237 score: 787.0
IPR006329	AMP deaminase	SFLD	SFLDF00063	AMP_deaminase	coord: 54..723 e-value: 0.0 score: 964.8
IPR006650	Adenosine/AMP deaminase active site	PROSITE	PS00485	A_DEAMINASE	coord: 710..716
IPR032466	Metal-dependent hydrolase	SUPERFAMILY	51556	Metallo-dependent hydrolases	coord: 158..215 coord: 250..722

Blast

[Close]

BLAST of TCONS_00035628-protein vs. Swiss-Prot (Human)
Match: AMPD2 (AMP deaminase 2 OS=Homo sapiens GN=AMPD2 PE=1 SV=2)

HSP 1 Score: 707.983 bits (1826), Expect = 0.000e+0
Identity = 335/576 (58.16%), Postives = 435/576 (75.52%), Query Frame = 0

Query:  159 FQRINVGEQGAAGVPVDELNQAAQLLCEALYIRAKYMALSLQSFNSTTASSLENVNDEYKLDKMYNKLAEDAVTTPRPT--CVLEQGNPNLNCDGSVWKPFECDIPGDIGYNVELVDGVFQVLSCKKPVDGDSPNKKSTLHPYPCIEEFMEDQKFLLALSTHGPVKSFTFRRLQYLHSKFKLHCLLNEMKELASQKEIPHRDFYNVRKVDTHIHASSAMNQKHLLRFIKKKVKKHGDDVVEMKDGKPVTLSQVFDELNLNVYDLSVDKLDVHADGSLFHRFDKFNAKYNPIGKSKVREIFMKTDNYMGGRYFAELIKEVIEDLEESKYQNAELRISIYGRKKSEWDSLAKWVIKHDISSYNVRWLIQIPRLYDIYFANKQVESFEEIIDNIFRPLFEATINPSSHPEMHQFLRQVIGFDSVDDESKPEPFSFSKHSPKPKNWKKEHNPPYAYYLYYMYSNLVVLNHLRRERGFNIFQLRPHCGEAGPVHHVVTGFMLAENISHGLLLRKVPAMQYLYYLAQIGVAMSPLSNNSLFLNYHRNPLQDFFQRGLLISISTDDPLQFHFTKVTKRSQFEI 732
            FQR+ +  +   GVP  +L  AA+ +  AL+IR KYMALSLQSF  TT   L+ + ++    + Y +  +  V+   P     LEQ +P  +C+ S        +PGD+G  + +V GV  V + ++P   D    +  L PYP ++EF+ D   L+AL  +GP+KSF +RRLQYL SKF++H LLNEMKELA+QK++PHRDFYN+RKVDTHIHASS MNQKHLLRFIK+ +K+H +++V ++ G+  TL +VF+ +NL  YDLSVD LDVHAD + FHRFDKFNAKYNPIG+S +REIF+KTDN + G+YFA +IKEV+ DLEESKYQNAELR+SIYGR + EWD LA+W + H + S NVRWL+Q+PRL+D+Y    Q+ +F+E+++NIF PLFEAT++P+SHPE+H FL  V GFDSVDDESKPE   F+  SP P+ W +E NPPYAYYLYY ++N+ +LNHLRR+RGF+ F LRPHCGEAGP+HH+V+ FMLAENISHGLLLRK P +QYLYYLAQIG+AMSPLSNNSLFL+YHRNPL ++  RGL++S+STDDPLQFHFTK     ++ I
Sbjct:  219 FQRVTISGEEKCGVPFTDLLDAAKSVVRALFIREKYMALSLQSFCPTTRRYLQQLAEKPLETRTYEQGPDTPVSADAPVHPPALEQ-HPYEHCEPST-------MPGDLGLGLRMVRGVVHVYTRREP---DEHCSEVEL-PYPDLQEFVADVNVLMALIINGPIKSFCYRRLQYLSSKFQMHVLLNEMKELAAQKKVPHRDFYNIRKVDTHIHASSCMNQKHLLRFIKRAMKRHLEEIVHVEQGREQTLREVFESMNLTAYDLSVDTLDVHADRNTFHRFDKFNAKYNPIGESVLREIFIKTDNRVSGKYFAHIIKEVMSDLEESKYQNAELRLSIYGRSRDEWDKLARWAVMHRVHSPNVRWLVQVPRLFDVYRTKGQLANFQEMLENIFLPLFEATVHPASHPELHLFLEHVDGFDSVDDESKPENHVFNLESPLPEAWVEEDNPPYAYYLYYTFANMAMLNHLRRQRGFHTFVLRPHCGEAGPIHHLVSAFMLAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLSYHRNPLPEYLSRGLMVSLSTDDPLQFHFTKEPLMEEYSI 782

The following BLAST results are available for this feature:

BLAST of TCONS_00035628-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00035628-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AMPD2	0.000e+0	58.16	AMP deaminase 2 OS=Homo sapiens GN=AMPD2 PE=1 SV=2	[more]

You are here

TCONS_00035628-protein (polypeptide) - C. hemisphaerica