TCONS_00035624-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035624-protein
Unique NameTCONS_00035624-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length589

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035624-protein ID=TCONS_00035624-protein|Name=TCONS_00035624-protein|organism=Clytia hemisphaerica|type=polypeptide|length=589bp
MAGRPPSGFRLGTGAGGRAPLGTAMGRPPATGMNLPTTARPGTRGGMGPG
GALNSMVQISDRPVTRQGLGGIKTQGQGPQRQVMDKSYFLGILRQKMAEL
NNEIGKLTKEINQFNQENASYLSYEKRAENLAAEIKSLQGELADYNAIVD
KLNTNAGFEDLKEDCEWLKSQNDKEAKTIDKLFAQKQDKETILKQLEIEL
QQERSKTQSVVADMTPDLQKKYSQLMKHSMQLQQELETKQQNLDNLNQKV
DDLEEEVSQSPVKQEAVSLYEKISELEEKRASLIEEMKKKESPTEERERL
LRQVKEDNQEIARMEKRANEIREKTEKLQDEIGNLDMDLEEHHGERTAKY
KELRKREADMQEFLDSFDTTKAAAEDKRSTLETSIVQTLEKISRATVQTK
HMPSTKEFKQMQADLNFKETEMNKSKETSTGLDSEHARLQNDLEKVEQLE
TKITEELNSLKDRISKMTEELETFTDLSALKKNAEEKKSYLLDEKKGLQE
AKVRLKSDVEKKSNEYNTTKKKLEENETYSQLGNLERKWQHIEQNNFAMK
EFIAQKSAESNFSGLKENVGGMVHQINNQIIEALGRGSR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_020865XLOC_020865Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035624TCONS_00035624Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 222..263
NoneNo IPR availableCOILSCoilCoilcoord: 90..117
NoneNo IPR availableCOILSCoilCoilcoord: 179..213
NoneNo IPR availableCOILSCoilCoilcoord: 266..286
NoneNo IPR availableCOILSCoilCoilcoord: 121..155
NoneNo IPR availableCOILSCoilCoilcoord: 481..526
NoneNo IPR availableCOILSCoilCoilcoord: 408..477
NoneNo IPR availableCOILSCoilCoilcoord: 297..338
NoneNo IPR availableGENE3D1.20.120.330coord: 90..197
e-value: 9.7E-7
score: 28.0
coord: 397..545
e-value: 5.3E-4
score: 19.2
NoneNo IPR availableGENE3D1.20.5.50coord: 198..292
e-value: 0.0012
score: 18.1
coord: 293..396
e-value: 3.4E-4
score: 19.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34

Blast
[Close]
BLAST of TCONS_00035624-protein vs. Swiss-Prot (Human)
Match: IFT74 (Intraflagellar transport protein 74 homolog OS=Homo sapiens GN=IFT74 PE=1 SV=1)

HSP 1 Score: 528.865 bits (1361), Expect = 0.000e+0
Identity = 289/591 (48.90%), Postives = 400/591 (67.68%), Query Frame = 0 
Query:    1 MAGRPPSGFRLGTGAGGRAPLGTAMGRPPATGMNLPTTARPGTRGG-MGPGGALNSMVQISDRPVTRQGLGGIKTQGQGPQRQVMDKSYFLGILRQKMAELNNEIGKLTKEINQFNQENASYLSYEKRAENLAAEIKSLQGELADYNAIVDKLNTNAGFEDLKEDCEWLKSQNDKEAKTIDKLFAQKQDKETILKQLEIELQQERSKTQSVVADMTPDLQKKYSQLMKHSMQLQQELETKQQNLDNLNQKVDDLEEEVSQSPVKQEAVSLYEKISELEEKRASLIEEMKKKESPTEERERLLRQVKEDNQEIARMEKRANEIREKTEKLQDEIGNLDMDLEEHHGERTAKYKELRKREADMQEFLDSFDTTKAAAEDKRSTLETSIVQTLEKISRATVQTKHMPST--KEFKQMQADLNFKETEMNKSKETSTGLDSEHARLQNDLEKVEQLETKITEELNSLKDRISKMTEELETFTDLSALKKNAEEKKSYLLDEKKGLQEAKVRLKSDVEKKSNEYNTTKKKLEENETYSQLGNLERKWQHIEQNNFAMKEFIAQKSAESNFSGLKENVGGMVHQINNQIIEALGRGS 588
            + GRPPSG R      G   + TAM  PP T       ARPG+RG  +G GG L+S ++++ RPVT+QGL G+KT  +GPQRQ++DKSY+LG+LR K++EL  E+ KL K I  +NQEN+ YLSYEKRAE LA EIK LQG+LADYN +VDKLNTN   E++  D   LK+QND+E +++D +F ++Q KE  ++ +E E++QE+  T  ++ +M+ + Q KY ++   + +L QEL+T QQ LD+ N K + LE E++ S VKQEAV L+EK+ ELE  R  +I E K   SP EERE+LL+Q+K+DNQEIA ME++  + +EK  +  +EI  LDMDLEEH GE   KYKEL+KRE  M  F+++F+ TK     +++ +E +IV  LE  SR   + + + S   +E K MQ DLNFK TE+ KS+ T+  L S+  RLQ DL+K+E LE+K+TEE +SLK +I +MT +LE + DL ALK + EEK   L  E+  L   +   K  +EK++ EY   K +L+ENET+SQL NLERKWQH+EQNNFAMKEFIA KS ES++  +K+NV   + + N  I++AL   S
Sbjct:   20 LTGRPPSGIR---PLSGNIRVATAM--PPGT-------ARPGSRGCPIGTGGVLSSQIKVAHRPVTQQGLTGMKTGTKGPQRQILDKSYYLGLLRSKISELTTEVNKLQKGIEMYNQENSVYLSYEKRAETLAVEIKELQGQLADYNMLVDKLNTNTEMEEVMNDYNMLKAQNDRETQSLDVIFTERQAKEKQIRSVEEEIEQEKQATDDIIKNMSFENQVKYLEMKTTNEKLLQELDTLQQQLDSQNMKKESLEAEIAHSQVKQEAVLLHEKLYELESHRDQMIAEDKSIGSPMEEREKLLKQIKDDNQEIASMERQLTDTKEKINQFIEEIRQLDMDLEEHQGEMNQKYKELKKREEHMDTFIETFEETKNQELKRKAQIEANIVALLEHCSRNINRIEQISSITNQELKMMQDDLNFKSTEVQKSQSTAQNLTSDIQRLQLDLQKMELLESKMTEEQHSLKSKIKQMTTDLEIYNDLPALKSSGEEKIKKLHQERMILSTHRNAFKKIMEKQNIEYEALKTQLQENETHSQLTNLERKWQHLEQNNFAMKEFIATKSQESDYQPIKKNVTKQIAEYNKTIVDALHSTS 598
The following BLAST results are available for this feature:
BLAST of TCONS_00035624-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IFT740.000e+048.90Intraflagellar transport protein 74 homolog OS=Hom... [more]
back to top