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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00035332-protein ID=TCONS_00035332-protein|Name=TCONS_00035332-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1583bp
MYNQQQMQYAQQAAAMWSQYWQQASQQTVQQQQQQQAFGQQQYPQQMMPN
AQAQPNQPPLPSQPPPPNQPPPPQNQPTPPQHQPAPPPPPQQGPHQPMQN
NSFSQGPVTYQQSDQSWNNHQPQQPQIGPQKPPQHQPPQHQPPPPPQPQP
QQHKPGPKPLMGTDAQWGNQQGQPQGAENQQWGQQNQWDQQNHQQQQHHP
GQEQWNQDQQQNERWGQHGQRGQAQWAGQEPNQEGQWGQQQGQWGEQHPQ
KQWDDQQHHQQQQEGQWGDQSQAQLNKDQQWNQDQQWNEKNQQDQWGPSA
NQQQNKWAGNQQPPNKGNQRGGHSQGPPGRGNQFQGPKSNQTKNNNQLGG
QRQQPPQQRNQWNNNQGPQQNRNNPWKGGNNNANNKGPGNNEKQWNSNQG
NYQQNKWNKPNNNPNQKPPFNKNNQQPPNQKNNFNNHNKPQVSNHKHTVT
STTFAMGNIGALMDQPLEPPANQNKYPAPKKEPPVQFTKPNTTFEKQIGP
AKPPPIPENKPVQPAEPPKDTSSDSLESLQKQLEMLENQIKNYQKEYQKW
HQDFVKWQKEHQNHPDQKQYIDYQKKYQKLIEEQQTQLKGQYAELQKKIV
QKKADTKKAEEIKKKEEENKKKEEEKKKREDTARKAELAKLESEKKALGA
AKIAALGLSMKSPFHTPPPPPATSAKPPVTSSSATISKAPVLHPPEDSRK
KTSGAAKIAALMLNQVEANKSKAAEMPQAKKAGASKIAALGLGGSSTAAP
PAVPGPPVKKEEHGVPHPADKPVLPQTSVSFSTEDLMNIKALADGLFKGG
TAAPPQGSSTTITDVKPKQTMVIKRATLHFPGIRCRFFPNCRFRGTCKYE
HPVCPNVSSCKDSQCSYEHPMMNEDPRPDPPHLDSRKRDFPLDHPDMPHG
AGAKQPKLDGHLESRVDEIYERRRQEILGGGPRPSVEQIGTNSDPDLDVY
ERRRRELLPEPSDPYAPRPADPFGDRHDLHPLPPRRDPYLDERDRWERDP
YARDHDRLPPPRDPLLDPYPRDLPPPPRDPLYRDPYLDRPPARELARREQ
DIYGPPADRRPLPPVDYNHTAPSEAPPRTLDYGHGGPPPRADDKRRDPVL
REPLPAKPDDRFRDSRESRDRERDSREKDRDSRERSSRDRDGRDSRDRGR
ESRDRDRDRRRDDRDSRHRDDRDRRSDSSRSKGRDERDRPRDERDRHGRD
RRDDDRHRDRYNESRPSDYLRRIEEREKERNHREGYRDFEMLYQGTGGSP
SSSDRRMESSGPSRIPEDELKPEVISAMDIFDAPGRSKRPTNIVIILRGI
PGSGKSYVAKIIKEKEAYYGGSTPRILALDDYFMSEKQEYVFEEEVEETY
RSSLLKAFNKTLADGFFPLVIVEAINHKTKHFDAFWSDAKHKGFEVYIAE
LFGEIDQCLERSIHKRTKHDVEEMLREWEKAPVYYKRLDVSSLLQQAGID
DVEMEEAQHEEEVEEIPNPNKEEEEDEELPDTFHIPKSKWDSSSKQETLA
KLDGFKRIKDENKKGMTQDDHGDIDEEEDDPYGEKEADMRLGKKRVRWKD
LEDKKQIDHQRKIGFTIGMDWNILTNPNAQIPM Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR015943 | WD40/YVTN_repeat-like_dom |
| IPR027417 | P-loop_NTPase |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 519..560 |
| None | No IPR available | COILS | Coil | Coil | coord: 578..642 |
| None | No IPR available | PRINTS | PR01217 | PRICHEXTENSN | coord: 55..67
score: 36.92
coord: 139..164
score: 32.31
coord: 121..138
score: 27.78
coord: 68..89
score: 47.27 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 1292..1530
e-value: 6.4E-16
score: 58.4 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1509..1538 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 600..644 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 871..911 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 745..773 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..533 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1458..1496 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 660..706 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 925..1270 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | GENE3D | 2.130.10.10 | | coord: 518..864
e-value: 1.3E-4
score: 20.2 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 1293..1441 |
Blast
BLAST of TCONS_00035332-protein vs. Swiss-Prot (Human)
Match: YLPM1 (YLP motif-containing protein 1 OS=Homo sapiens GN=YLPM1 PE=1 SV=3) HSP 1 Score: 251.906 bits (642), Expect = 2.431e-67 Identity = 141/338 (41.72%), Postives = 203/338 (60.06%), Query Frame = 0
Query: 1266 PEDELKPEVISAMDIFDAPGRSKRPTNIVIILRGIPGSGKSYVAKIIKEKEAYYGGSTPRILALDDYFMSEKQE-----------------YVFEEEVEETYRSSLLKAFNKTLADGFFPLVIVEAINHKTKHFDAFWSDAKHKGFEVYIAELFGEIDQCLERSIHKRTKHDVEEMLREWEKAPVYYKRLDVSSLLQQAGIDDVEMEEAQHEEEVEEIPNPNKEEEEDEELPDTFHIPKSKWDSSSKQETLAKLDGF----KRIKDENKKGMTQDDHGDIDEEEDDPYGEKEADMRLGKKRVRWKDLEDKKQIDHQRKIGFTIG-MDWNILTNPNAQI 1581
P E KPE + DI PGR RP IV+I+RG+PGSGK++VAK+I++KE +GG PR+L+LDDYF++E ++ Y +E E+EETYR+S+ K F KTL DGFFP +I++AIN + +HFD FWS AK KGFEVY+AE+ + C +R+IH R ++ +M WE AP + RLD+ SLLQ A I++VEME+ + ++++ +EE + +IPKSKW+ + + L KLDG KR +D +D+ + ++ D E GKKRVRW DLE+KK D +R IGF +G DW +T+ + +
Sbjct: 1613 PRVEKKPESKNVDDILKPPGRESRPERIVVIMRGLPGSGKTHVAKLIRDKEVEFGGPAPRVLSLDDYFITEVEKEEKDPDSGKKVKKKVMEYEYEAEMEETYRTSMFKTFKKTLDDGFFPFIILDAINDRVRHFDQFWSAAKTKGFEVYLAEMSADNQTCGKRNIHGRKLKEINKMADHWETAPRHMMRLDIRSLLQDAAIEEVEMEDF----DANIEEQKEEKKDAEEEESELGYIPKSKWEMDTSEAKLDKLDGLRTGTKRKRDWEAIASRMEDYLQLPDDYDTRASEP------GKKRVRWADLEEKKDADRKRAIGFVVGQTDWEKITDESGHL 1940
The following BLAST results are available for this feature:
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