TCONS_00035264-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035264-protein
Unique NameTCONS_00035264-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length358

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035264-protein ID=TCONS_00035264-protein|Name=TCONS_00035264-protein|organism=Clytia hemisphaerica|type=polypeptide|length=358bp
PAKCHSKSFKHFCIKAEVEKSIMKLGTLLLATCLAFASGAWVPEMENEGL
YEGDMILDPDQQKEVEDGTFTFSSTGNRNKLWPNAVVPYSLTSDLARDGK
FMREFQHSIDQYHKYTCIRFKRRSNERAYIGFYMGGGCSSPVGYTGGRNR
VSLSKGCHWRSTIMHEIGHSLGFHHEQSRPDRDNHVTILFHNVARGTEHN
FKKQSYSTTDSKGTPYDYRSMMHYSWDAFGSGKMTIQTKDPSMQYEIGIG
QGDQGFSDIDIKQLNLLYGCSQSNERLPPYTAPSKDCHDLRGCASQVHEG
NCQSSSWQTYLRKHCRKSCGFCKVTGGPNTPKPWTPGPDTPRPNTPKPWT
PKPDTPRP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_020579XLOC_020579Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035264TCONS_00035264Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001506Peptidase_M12A
IPR006026Peptidase_Metallo
IPR003582ShKT_dom
IPR024079MetalloPept_cat_dom
IPR034035Astacin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001506Peptidase M12APRINTSPR00480ASTACINcoord: 105..123
score: 29.21
coord: 157..175
score: 46.58
coord: 176..193
score: 50.56
coord: 215..230
score: 51.88
coord: 256..269
score: 42.62
IPR001506Peptidase M12APFAMPF01400Astacincoord: 81..271
e-value: 1.1E-56
score: 191.4
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 78..220
e-value: 2.1E-43
score: 160.2
IPR003582ShKT domainSMARTSM00254ShkT_1coord: 286..323
e-value: 0.0017
score: 27.6
IPR003582ShKT domainPFAMPF01549ShKcoord: 287..322
e-value: 1.4E-6
score: 28.6
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 287..322
score: 9.448
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 73..272
e-value: 1.2E-55
score: 188.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..358
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 77..271
IPR034035Astacin-like metallopeptidase domainCDDcd04280ZnMc_astacin_likecoord: 84..268
e-value: 1.14178E-75
score: 232.847

Blast
[Close]
BLAST of TCONS_00035264-protein vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 3.439e-35
Identity = 100/271 (36.90%), Postives = 135/271 (49.82%), Query Frame = 0 
Query:   22 IMKLGTLLLATCLAFASGAWVPE-------ME------NEGL----YEGDMILDPDQQKEVEDGTFTFSSTGNRNKLWPNAVVPYSLTSDLARDGKFMREFQHSIDQYHKYTCIRFKRRSNERAYIGFYMGGGCSSPVG-YTGGRNRVSLSKGCHWRSTIMHEIGHSLGFHHEQSRPDRDNHVTILFHNVARGTEHNFKKQSYSTTDSKGTPYDYRSMMHYSWDAFGSGKM-TIQTKDPSMQYEIGIGQGDQGFSDIDIKQLNLLYGCSQS 273
            +  L   L    L   SG   PE       M+      NEGL    +EGD+ LD  Q +         S  G + + WP+ + PY L   L  + K +    ++ ++Y   TCI FK  + E  YI  + G GC S VG    G+  +S+   C   +T+ HE  H+LGF HEQSR DRD++V I++  +  G EHNF   S   +DS   PYDY S+MHYS  AF +G   TI T+     +E  IGQ    FSD D+ +LN LY CS S
Sbjct:    3 LWNLSWFLFLDALLVISGLATPENFDVDGGMDQDIFDINEGLGLDLFEGDIRLDRAQIRN--------SIIGEKYR-WPHTI-PYVLEDSLEMNAKGV--ILNAFERYRLKTCIDFKPWAGETNYISVFKGSGCWSSVGNRRVGKQELSIGANCDRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTEPTIVTRIS--DFEDVIGQ-RMDFSDSDLLKLNQLYNCSSS 258
The following BLAST results are available for this feature:
BLAST of TCONS_00035264-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1B3.439e-3536.90Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=... [more]
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