TCONS_00035248-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035248-protein
Unique NameTCONS_00035248-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length214

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035248-protein ID=TCONS_00035248-protein|Name=TCONS_00035248-protein|organism=Clytia hemisphaerica|type=polypeptide|length=214bp
NFVNGGVMIDNIMGAKGTKLTQDDLRELQKATYFDKKELQKWYRDFMKDC
PSGQLHQEEFERIYQQFFPFGDPSKFAAFVFKVFDKNADGCISFKEFITA
LSITSRGTLDEKLEWAFSLYDLDKDGYITRDEMLHIVESIYRMVGKMVDL
PEDEDTPEKRVDKIFQKMDKNHDGQLTMEEFREGSKCDPWIVQALAIDLP
ESEITGEVKTQPTT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_020568XLOC_020568Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035248TCONS_00035248Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00450RECOVERINcoord: 80..101
score: 61.36
coord: 20..34
score: 37.95
coord: 150..165
score: 73.56
coord: 126..144
score: 60.53
coord: 176..196
score: 51.1
coord: 104..123
score: 72.69
coord: 34..53
score: 56.35
NoneNo IPR availableGENE3D1.10.238.10coord: 112..198
e-value: 3.4E-23
score: 80.9
NoneNo IPR availableGENE3D1.10.238.110coord: 13..111
e-value: 5.3E-37
score: 126.2
IPR002048EF-hand domainSMARTSM00054efh_1coord: 76..104
e-value: 0.011
score: 24.9
coord: 160..188
e-value: 7.3E-4
score: 28.8
coord: 112..140
e-value: 7.8E-6
score: 35.4
IPR002048EF-hand domainPFAMPF00036EF-hand_1coord: 80..102
e-value: 3.2E-6
score: 26.2
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 110..183
e-value: 1.8E-17
score: 63.5
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 156..191
score: 12.728
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 72..107
score: 13.091
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 108..143
score: 13.816
IPR002048EF-hand domainCDDcd00051EFhcoord: 112..184
e-value: 6.58291E-15
score: 65.2617
IPR002048EF-hand domainCDDcd00051EFhcoord: 79..137
e-value: 1.24945E-15
score: 67.1877
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 169..181
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 121..133
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 85..97
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 13..199

Blast
[Close]
BLAST of TCONS_00035248-protein vs. Swiss-Prot (Human)
Match: NCS1 (Neuronal calcium sensor 1 OS=Homo sapiens GN=NCS1 PE=1 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 1.832e-91
Identity = 123/185 (66.49%), Postives = 152/185 (82.16%), Query Frame = 0 
Query:   13 MGAKGTKLTQDDLRELQKATYFDKKELQKWYRDFMKDCPSGQLHQEEFERIYQQFFPFGDPSKFAAFVFKVFDKNADGCISFKEFITALSITSRGTLDEKLEWAFSLYDLDKDGYITRDEMLHIVESIYRMVGKMVDLPEDEDTPEKRVDKIFQKMDKNHDGQLTMEEFREGSKCDPWIVQALAI 197
            MG   +KL  + + EL + TYF +KE+Q+WY+ F+KDCPSGQL    F++IY+QFFPFGDP+KFA FVF VFD+N DG I F EFI ALS+TSRGTLDEKL WAF LYDLD DGYITR+EML IV++IY+MVG  V+LPE+E+TPEKRVD+IF  MDKN DG+LT++EF+EGSK DP IVQAL++
Sbjct:    1 MGKSNSKLKPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALSL 185
The following BLAST results are available for this feature:
BLAST of TCONS_00035248-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NCS11.832e-9166.49Neuronal calcium sensor 1 OS=Homo sapiens GN=NCS1 ... [more]
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