TCONS_00035211-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00035211-protein
Unique Name	TCONS_00035211-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	654

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00035211-protein ID=TCONS_00035211-protein|Name=TCONS_00035211-protein|organism=Clytia hemisphaerica|type=polypeptide|length=654bp
MASNEKDWKSKPSEEVLKLKKLLLREEERKRTNLLQSISERSQELSNINV
PTTSTLEPLLSNQSSVEYQLQQQVQFYQDALSSLQTRSNHIAEENAKLYE
RMRESILKEPQFSSSDEGTESTQEEKSSTLSDGEEVAPYKQNTKTTKKER
LMKTKQELRLEKSKKHQHDEIEELSLLGDEMEKLKELQDAKTQHLESLLH
TARRQVDEKEKIISNLKSEMNYYKMPVKEDPNSVVNLPMTKSLPNSIPGT
KLVQRLTRECQDLAESLEKQQKQVEAGNQREVVAYEQVKKSCDLVEQVQL
EKQELMVQVLQLKKDLAEYKEKYADMQKKHEEHQAMFNKRSKDKLQSSNK
ELSQKVEEQALKLAGLQNELEKVTRSKVELKRELDQHQLKILCQETETNA
LMDETRRDTLEVMKSKSLLEQEMNQVRLDCRSKEKKKQQEIEHLKIELNE
TKRRLQSTEESVNELQNDILQQTNNSNTIEQKFHREQIQRQLDQSSYEEQ
KRRMVLESGKREQELLQLIQLNEERAAQSQDELSQIMENQAEIVQRFKEE
CLTLKDKLISEKQLRGQKVSELQSKSKRFLGTIQELKMINSQKDKQITER
NEQLCIFQEECADYKDQVIALMNKQNIILRDRNLLTKEIEMLKSQLKSFK
FETP

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_020544	XLOC_020544	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00035211	TCONS_00035211	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR031887	SDCCAG8

Vocabulary: **Biological Process**
Term	Definition
GO:0007098	centrosome cycle

Vocabulary: **Cellular Component**
Term	Definition
GO:0005813	centrosome

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007098	centrosome cycle
cellular_component	GO:0005813	centrosome

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 253..280
None	No IPR available	COILS	Coil	Coil	coord: 519..539
None	No IPR available	COILS	Coil	Coil	coord: 416..482
None	No IPR available	COILS	Coil	Coil	coord: 199..219
None	No IPR available	COILS	Coil	Coil	coord: 338..397
None	No IPR available	COILS	Coil	Coil	coord: 295..336
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..151
IPR031887	Serologically defined colon cancer antigen 8	PFAM	PF15964	CCCAP	coord: 12..646 e-value: 7.0E-27 score: 93.9

Blast

[Close]

BLAST of TCONS_00035211-protein vs. Swiss-Prot (Human)
Match: SDCG8 (Serologically defined colon cancer antigen 8 OS=Homo sapiens GN=SDCCAG8 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.383e-20
Identity = 152/648 (23.46%), Postives = 300/648 (46.30%), Query Frame = 0

Query:   41 RSQELSNINVPTTSTLEPLLSNQSSVEYQLQQQVQFYQDALSSLQTRSNHIAEENAKLYERMR----ESILKEPQFSSSDEGTESTQEEKSSTLSDGEEVAPYKQNTKTTKKERLMKTKQELRLEKSKKHQHDEIEELSLLGD--EMEKLKELQDAKTQHLESLLHTARRQVDEKEKIISNLKSEMNYYKMPVKEDP-NSVVNLPMTKSLPNSIPG-------TKLVQRLTRECQDLAESLEKQQKQVEAGNQREVVAYEQVKKSCDLVEQVQLEKQELMVQVLQLKKDLAEYKEKYADMQKKHEEHQAMFNKRSKDKLQSSNKELSQKVEEQALKLAGLQNELEKVTRSKVELKRELDQHQLKILCQETETNALMDETRRDTLEVMKSKSLLEQEMNQVRLDCRSKEKKKQQEIEHLKIELNETKRRLQSTEESVNELQNDILQQTNNSNTIEQKFHREQIQRQLDQSSYEEQKRRMVLESGKREQELLQLIQLNEERAAQSQDELSQIMENQAEIVQRFKEECLTLKDKLISEKQLRGQKVSELQSKSKRF----LGTIQELKMINSQKDKQITERNEQLCIFQEECADYK---------------------DQVIALMNKQNIILRDRNLLTKEIEMLKSQLKSF 649
            RS E    N+PT   L   +++QS   + L+ +V+F ++ LS ++ +   +  EN  L ++++    E  L+E          +++    +S ++ GE+        +T+K+                 H + +  + +  G+  E+EKLK   + K +  ES L   R  + E ++   +LK ++ + +  +  +  N V  L +  +   ++          + ++RL +E  DL  +L   +  +    QRE  AYEQVK+   + E+   EK + ++Q  QL+K+L    E+        +E +A+     K ++    + +  K+   +  +A L+ ++EKVT+ K+    +L++ Q ++  +E +   +  E R    +    K   E+E  + R       + K QEIE L+IEL+E+K+ L+  ++     + + L+ T      E + H  + ++   Q S+ ++ +   L++ +REQEL Q IQ  E +  ++++E   ++ +Q   + + KEEC TL  KL    Q    ++++L S+ KR+    LG +Q               RNE+L   +E+C  +                       Q++ L++KQN +L +R  L++E++ L++QL S 
Sbjct:  103 RSLEHEETNMPTMHDLVHTINDQSQYIHHLEAEVKFCKEELSGMKNKIQVVVLENEGLQQQLKSQRQEETLREQTL------LDASGNMHNSWITTGEDSGV----GETSKR--------------PFSHDNADFGKAASAGEQLELEKLKLTYEEKCEIEESQLKFLRNDLAEYQRTCEDLKEQLKHKEFLLAANTCNRVGGLCLKCAQHEAVLSQTHTNVHMQTIERLVKERDDLMSALVSVRSSLADTQQREASAYEQVKQVLQISEEANFEKTKALIQCDQLRKELERQAERLEKELASQQEKRAIEKDMMKKEITKEREYMGSKMLILSQNIAQLEAQVEKVTKEKISAINQLEEIQSQLASREMDVTKVCGEMRYQLNKTNMEKDEAEKEHREFRAKTNRDLEIKDQEIEKLRIELDESKQHLEQEQQKAALAREECLRLTELLGESEHQLHLTRQEKDSIQQSFSKEAKAQALQAQQREQELTQKIQQMEAQHDKTENEQYLLLTSQNTFLTKLKEECCTLAKKLEQISQKTRSEIAQL-SQEKRYTYDKLGKLQ--------------RRNEEL---EEQCVQHGRVHETMKQRLRQLDKHSQATAQQLVQLLSKQNQLLLERQSLSEEVDRLRTQLPSM 708

The following BLAST results are available for this feature:

BLAST of TCONS_00035211-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00035211-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SDCG8	4.383e-20	23.46	Serologically defined colon cancer antigen 8 OS=Ho...	[more]

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TCONS_00035211-protein (polypeptide) - C. hemisphaerica