TCONS_00034914-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00034914-protein
Unique NameTCONS_00034914-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length936

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00034914-protein ID=TCONS_00034914-protein|Name=TCONS_00034914-protein|organism=Clytia hemisphaerica|type=polypeptide|length=936bp
MDHSRLMDQSRPQSSASNFVLSELEWNDFSDTRRDPPKSDCIYRIGPAPR
EDVSGGTESSPIGTLDSDLEEGFTSKKSKKAAASRALIIYFAKMARKGST
ERIDYRFLDSLFKGGANVNVTDKHGQTVLHEVARNWNTDLAKYFLGRGAD
INKGDNWARTPLHLSSAVNHVEMVEFLINNGAHVHAKTNGELQSPIHYAA
KYNAVGSLKILLQLKAKMNDRDYKQRTPLFIAAEMAREEAARYLVDYGVP
VGTFDDTGMSTIAHMVEKMPHIAVDALDQFMVDDTAFRKSFFYLNYMEYD
PIRYREESQTHDEFGVPLVVDKKEAKKRKRKKQDQCTTTPLKLAVQLEEF
DIIMHPVMQRLIKEKWNKFGRFGAIIAASIHLIYIMIWTMLAIFIPRDGN
YYGGSEKYWRIPLELMGVLMTLYFILTQIWDRKIKFKDQKTFRLWRTRQL
NRDMDFCHPRWSQEKTFLESEMKAVRTRKQGLLSDPWNVFDFLTYAAVST
VIVTRLASFFIKKDAPSDEIHLKAYTATLIFMWLHFMKSCRPFTTLGPFI
TMLGHVMKDTITFAFLFVEFFVPYTVSFWILFGGTHNAMTVVKHNEANPG
DEVDTVDWEEFHNTVFSVWQVMLNVDFNWDALVVVDRLMAQVLVGTFFAF
ATVLCLNLYIALLSETFNRVYQNATANASLLQANTILQLESILSKKKKAV
VFKHIQEECGPLVAPQAEDPAGVTDEELWDKVIRSVHLRFDQLADYVKST
ANPKSDCEIEHMKKVRKYEQDKEMFDVYQILMQRDKELHQMRLDIFELKR
MFLEYYGHPEMIGNRPHYKPPPKCSIQMPTPVPKYQPPAPQPKQNPLPPS
SSRPGSSGVGQHPQNDSFSKRRNNEIFRSIMESKSQEGLNVLADGDDPNL
DDDFDLSGSWENIPPTEFSCGSDGGSGGGGSGGGGS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_020320XLOC_020320Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00034914TCONS_00034914Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR005821Ion_trans_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005216ion channel activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006811ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0005216 ion channel activity
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 224..256
e-value: 1.9
score: 17.5
coord: 191..220
e-value: 0.11
score: 21.6
coord: 124..153
e-value: 0.032
score: 23.4
coord: 157..186
e-value: 0.014
score: 24.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 157..189
score: 11.995
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 224..256
score: 8.843
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 124..156
score: 11.487
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 191..223
score: 9.137
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 82..200
e-value: 1.7E-27
score: 95.8
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 201..367
e-value: 3.4E-15
score: 55.6
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 107..187
e-value: 1.0E-9
score: 38.8
coord: 193..252
e-value: 1.2E-7
score: 32.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 104..262
score: 40.611
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 107..277
coord: 330..353
NoneNo IPR availableGENE3D1.10.287.70coord: 374..672
e-value: 1.2E-8
score: 34.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 816..936
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..68
NoneNo IPR availableCDDcd00204ANKcoord: 119..231
e-value: 2.28553E-26
score: 105.158
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 479..674
e-value: 4.9E-14
score: 52.0

Blast
[Close]
BLAST of TCONS_00034914-protein vs. Swiss-Prot (Human)
Match: ANK1 (Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 9.257e-19
Identity = 56/164 (34.15%), Postives = 86/164 (52.44%), Query Frame = 0 
Query:  111 LFKGGANVNVTDKHGQTVLHEVARNWNTDLAKYFLGRGADINKGDNWARTPLHLSSAVNHVEMVEFLINNGAHVHAKTNGELQSPIHYAAKYNAVGSLKILLQLKAKMNDRDYKQRTPLFIAAEMAREEAARYLVDYGVPVGTFDDTGMSTIAHMVEKMPHIAV 274
            L   GA+VN T ++G T LH  +R  N  + +  L RGA I        TPLH ++   HV + E L+++GA + AKT   L SPIH AA+ + +  +++LLQ  A+++D      TPL +AA       A+ L+D G    +    G + + H+  K  H+ V
Sbjct:  225 LLNRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQIETKTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGL-SPIHMAAQGDHLDCVRLLLQYDAEIDDITLDHLTPLHVAAHCGHHRVAKVLLDKGAKPNSRALNGFTPL-HIACKKNHVRV 386
The following BLAST results are available for this feature:
BLAST of TCONS_00034914-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANK19.257e-1934.15Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3[more]
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