TCONS_00030121-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00030121-protein
Unique NameTCONS_00030121-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1204

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00030121-protein ID=TCONS_00030121-protein|Name=TCONS_00030121-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1204bp
ITWFVLLARSKINSTIKTPSEDLKIKADKDENLCHQKHGRCLVLQVIYHV
NMFSFLFNSRQNKNAQKKEENDWKKDLEDYQRSPNLPVLDPSKIRVLIFK
ESSAKKTLMFDSDALVMLPTQPNSPICPLSKTKKAKPDPFPSPSSQKYQI
TKAKQDVKMLGEMIFGSVAMVYKGSILKVHLIRSPPQLLMTKVFALRSRS
AGVNFCDSELSSCNSLSRPVDVASTPSLSSSSASMPASPTSDTEINRSFS
TPVNMRNKKSSFLNPHNSISLLAAPSWSMSDLDTLSLSSSFLSLNGGSPH
DSQAGSFRYRFSRSKKTSLDSPVWRSRTEQSEELRSVYKQQPKIGVGIIF
NLWDNAEDNRAFQDFFFSHYTLFEAQLQAFRVKIEKSFYLRQKFLDTAVE
ALEGFREDVLRLCYTPRIIEPVWLNLTSTVERKQKECASKFFNTFLEIYD
MCENKETSYFLSNLMTAVLTHHLSWINTVISCEKNSKKCSLNKHASSTID
ILARCHPYNPLWAQICDLYGCLGSPFKLARTVIVGKNIKLISKILQFLTY
FIRCCEVQENFIGAERPKDFLNRQSGSNWNDSLSSSSSAQTNIQNWFERS
CSIITSQNVDPFKEFKNYNHLDALDERDEILTPRTSDRNIIEHLKSMNLD
TTKCYCVFLQALNKVSDLRSYVNMEDIKKKELNITNDSGKPGLVASKSCM
ICRTLEKGMFEQFCDKCKLDLQKSSIEVVNTVCLHCVKRLENVSKCQNFI
ENSTCSCGSGSTKDCICNGNMKQTQVCPKKPSFICYCCDPSTYGDLELDI
KADTSCGSLTDLDLTPRPRKSSDPIDVVPMSKTNSKFGTMRSSTNSHDSG
TELEHSEGFNSCSGDSDSCFTRADSMSSQGVDSDYCSVESEQLASTLIEN
SLLLMSNKDIGRTEIPDKNICRTELSGDVCRTDVPDTEHYPHPPVTKSLS
TTTLKSSLALDFDDTTDTNTDTDVNTIEEHSQDTLTLDLDELRLKELSLP
RSKPKSHRKHQSTRYSWSDTPSFGKSMLAGYTENYLGDFVLQGCKSIDQA
QLANDLLRTVKYSVLDEEINDAVCIVADTDNWTCEVRGMSKRIGQHNQNT
SFEPYTTEVFASNIISSMVESIKELCSLNMPPNFCLLHVEEQLRDLFNKG
KVFAEYSNSNDHDESAKKSFMRVFGYHSTDIELLNAVGGTLTVPVAQDET
LYAV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_017234XLOC_017234Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00030121TCONS_00030121Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026156FNIP_fam
IPR028086FNIP_C_dom
IPR028085FNIP_mid_dom
IPR028084FNIP_N_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 63..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 815..862
IPR026156Folliculin-interacting protein familyPRINTSPR02073FOLLICULNIP1coord: 365..385
score: 46.03
coord: 1064..1082
score: 69.3
coord: 1024..1041
score: 56.02
coord: 489..513
score: 56.33
IPR028086Folliculin-interacting protein, C-terminal domainPFAMPF14638FNIP_Ccoord: 1004..1192
e-value: 1.7E-38
score: 132.0
IPR028085Folliculin-interacting protein, middle domainPFAMPF14637FNIP_Mcoord: 339..558
e-value: 4.9E-73
score: 245.8
IPR028084Folliculin-interacting protein, N-terminal domainPFAMPF14636FNIP_Ncoord: 146..188
e-value: 2.9E-12
score: 47.8

Blast
BLAST of TCONS_00030121-protein vs. Swiss-Prot (Human)
Match: FNIP1 (Folliculin-interacting protein 1 OS=Homo sapiens GN=FNIP1 PE=1 SV=3)

HSP 1 Score: 266.929 bits (681), Expect = 1.587e-73
Identity = 189/564 (33.51%), Postives = 288/564 (51.06%), Query Frame = 0
Query:   52 MFSFLFNSRQNKNAQKKEENDWKKDLEDYQRSPNLPVLDPSKIRVLIFKESSAK-KTLMFDS------DALVMLPTQPNSPICPLSKTKKAKPDPFPSPSSQ--------------KYQITKAKQDVKMLGEMIFGSVAMVYKGSILKVHLIRSPPQLLMTKVFALRSRS---AGVNFCDSELSSCN----SLSRPVDVASTPSLSSSSASMPASPTSDTEINRSFSTPVNMRNKKS-SFLNPHNSISLLAAPSWSMSDLDTLSLSSSFLSL---NGGSPHDSQ----AGSFRYRFSRSKKTSLDSPVW-RSRTEQSEEL-------RSVYKQQPKIGVGIIFNLWDNAEDNRAFQDFFFSHYTLFEAQLQAFRVKIEKSFYLRQKFLDTA---------VEALEGFREDVLRLCYTPRIIEPVWLNLTSTVERKQKECASKFFNTFLEIYDMCENKETSYFLSNLMTAVLTHHLSWINTVISCEKNSKKCSLNKHASSTIDILARCHPYNPLWAQICDLYGCLGSPFKLARTVIVGKNIKLISKILQFLTYFIRCCEVQENFI 562
            +F  LF+ R    A  ++  D      D   S  LP  DPS+IR++++++   + + ++FDS      + + +     ++ +    K  + KP    S S                KYQ ++   D  MLGEM+FGSVAM YKGS LK+H IRSPPQL+++KVF  R+ S     +N     L   N    +L    +      L +   S   SP       R+FS    +R  +S SF   H++   +     +      ++ S+S  SL      SP+ S     A S++ R+ RS+ TSL++ V+ R   E+S  L            ++ KI +G+IF+L  + ++N  F +FFFSH+ LFE+ +   +  IE++  + ++  D +         V+AL  FR  +  L   PRI EPVWL + S    K   C    +    E   + EN   + FL  L+TAVLT+HL+W+ TV+   +   K  L KH+S ++D+LA+ HPYNPLWAQ+ DLYG +GSP +LARTV+VGK   ++ ++L FLTYFIRC E+QE  +
Sbjct:    5 LFQKLFSKRTGLGAPGRDARD-----PDCGFSWPLPEFDPSQIRLIVYQDCERRGRNVLFDSSVKRRNEDISVSKLGSDAQVKVFGKCCQLKPGGDSSSSLDSSVTSSSDIKDQCLKYQGSRCSSDANMLGEMMFGSVAMSYKGSTLKIHQIRSPPQLMLSKVFTARTGSSICGSLNTLQDSLEFINQDNNTLKADNNTVINGLLGNIGLSQFCSP------RRAFSEQGPLRLIRSASFFAVHSNPMDMPGRELNEDRDSGIARSASLSSLLITPFPSPNSSLTRSCASSYQRRWRRSQTTSLENGVFPRWSIEESFNLSDESCGPNPGIVRKKKIAIGVIFSLSKDEDENNKFNEFFFSHFPLFESHMNKLKSAIEQAMKMSRRSADASQRSLAYNRIVDALNEFRTTICNLYTMPRIGEPVWLTMMSGTPEKNHLC----YRFMKEFTFLMENASKNQFLPALITAVLTNHLAWVPTVMPNGQPPIKIFLEKHSSQSVDMLAKTHPYNPLWAQLGDLYGAIGSPVRLARTVVVGKRQDMVQRLLYFLTYFIRCSELQETHL 553          

HSP 2 Score: 119.013 bits (297), Expect = 6.299e-27
Identity = 66/177 (37.29%), Postives = 103/177 (58.19%), Query Frame = 0
Query: 1023 FGKSMLAGYTENYLGDFVLQGCKSIDQAQ--LANDLLRTVKYSVLDEEINDAVCIVADTDNWTCEVRGMSKRIGQHNQNTSFEPYTTEVFASNIISSMVESIKELCSLNMPPNFCLLHVEEQLRDLFNKGKVFAEYSNSNDHDESAKKSFMRVFGYHSTDIELLNAVGGTLTVPVAQ 1197
            FG+S+L GY  +Y+ DFVLQG  S ++ +  L +DL   V++ VLDE I +AVCI+AD D WT +V    +R+  +           EV  S+++S+++ S  +L   N+ PNFC++H+E++L++L+ K K+ +EY           K    V G  S+D+ LL AV  T +  VAQ
Sbjct:  996 FGRSLLGGYCSSYVPDFVLQGIGSDERFRQCLMSDLSHAVQHPVLDEPIAEAVCIIADMDKWTVQVASSQRRVTDNK-------LGKEVLVSSLVSNLLHSTLQLYKHNLSPNFCVMHLEDRLQELYFKSKMLSEYLRG--QMRVHVKELGVVLGIESSDLPLLAAVASTHSPYVAQ 1163          
The following BLAST results are available for this feature:
BLAST of TCONS_00030121-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FNIP11.587e-7333.51Folliculin-interacting protein 1 OS=Homo sapiens G... [more]
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