TCONS_00030102-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00030102-protein
Unique Name	TCONS_00030102-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	470

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00030102-protein ID=TCONS_00030102-protein|Name=TCONS_00030102-protein|organism=Clytia hemisphaerica|type=polypeptide|length=470bp
MSNIYIQEPPTNGKVLMKTSLGEIDIELWSKETPKACRNFIQLCMEGYYD
ETAFHRVVKGFIAQGGDPTGTGTGGESIYGAPFKDEFHQRLKFNRRGLVA
MANAGKDDNASQFFFTLDRTEELQKKHTIFGKVTGNTIYNMIRFNDLEVD
QEDRPLSPPKILKTEILSNPFEDIEPRDRKKKKQKDDSEKAGKIKSKSKA
TKNYKLLSFGEEAEDDENEDESTEDFGIKSSHDVLKEDKKLSAQPAVDEN
TLKRKDQELDSASIARKKLKKDTEVSAPQKEDLFRNKQKVENGEDEEEKK
KAERRKALQEEAKQLKKELKSKTSSFTDADPKQERDDKKKKKEPINDLMK
QLTEERDQYKNKKKKEKLLRKGDDRQAETLALLQSFQSSIASKIEENSTN
NENETNEEDDDDEGWLTHKLEFEKDPELSGAKDANMKGDDWYDIYDPRNP
MNQRRREKSKKSSKSSKRNR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_017221	XLOC_017221	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00030102	TCONS_00030102	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002130	Cyclophilin-type_PPIase_dom
IPR029000	Cyclophilin-like_dom
IPR020892	Cyclophilin-type_PPIase_CS

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding
GO:0000413	protein peptidyl-prolyl isomerization

Vocabulary: **Molecular Function**
Term	Definition
GO:0003755	peptidyl-prolyl cis-trans isomerase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 252..272
None	No IPR available	COILS	Coil	Coil	coord: 285..325
None	No IPR available	COILS	Coil	Coil	coord: 342..369
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..374
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 389..470
None	No IPR available	CDD	cd01925	cyclophilin_CeCYP16-like	coord: 8..176 e-value: 3.91635E-104 score: 309.282
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PRINTS	PR00153	CSAPPISMRASE	coord: 28..43 score: 40.21 coord: 54..66 score: 62.43 coord: 97..112 score: 57.27 coord: 125..140 score: 34.74 coord: 112..124 score: 42.1
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00160	Pro_isomerase	coord: 15..165 e-value: 8.0E-42 score: 143.1
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50072	CSA_PPIASE_2	coord: 19..166 score: 27.598
IPR029000	Cyclophilin-like domain	GENE3D	2.40.100.10		coord: 3..181 e-value: 2.1E-64 score: 216.1
IPR029000	Cyclophilin-like domain	SUPERFAMILY	50891	Cyclophilin-like	coord: 14..181
IPR020892	Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site	PROSITE	PS00170	CSA_PPIASE_1	coord: 49..66

Blast

[Close]

BLAST of TCONS_00030102-protein vs. Swiss-Prot (Human)
Match: CWC27 (Peptidyl-prolyl cis-trans isomerase CWC27 homolog OS=Homo sapiens GN=CWC27 PE=1 SV=1)

HSP 1 Score: 422.55 bits (1085), Expect = 6.528e-145
Identity = 243/492 (49.39%), Postives = 320/492 (65.04%), Query Frame = 0

Query:    1 MSNIYIQEPPTNGKVLMKTSLGEIDIELWSKETPKACRNFIQLCMEGYYDETAFHRVVKGFIAQGGDPTGTGTGGESIYGAPFKDEFHQRLKFNRRGLVAMANAGKDDNASQFFFTLDRTEELQKKHTIFGKVTGNTIYNMIRFNDLEVDQEDRPLSPPKILKTEILSNPFEDIEPRDRKKKKQKDDSEKAGKIKSKSKATKNYKLLSFGEEAEDDE---NEDESTEDFGIKSSHDVLKEDKKLSAQPAVD-------------ENTLKRKDQELDS--ASIAR----KKLKKDTEVSAPQKEDLFRNKQKVENGEDEEEKKKAERRKALQEEAKQLKKELKSKTSSFTDADPKQERDDKKKKKEPINDLMKQLTEERDQYKNKKKKEKLLRKGDDRQAETLALLQSFQSSIASKIEENSTNNENETNEEDDDDEGWLTHKLEFEKDPELSGAKDANMKGDDWYDIYDPRNPMNQRRREKSKKSSKSSKRNR 470
            MSNIYIQEPPTNGKVL+KT+ G+IDIELWSKE PKACRNFIQLC+E YYD T FHRVV GFI QGGDPTGTG+GGESIYGAPFKDEFH RL+FNRRGLVAMANAG  DN SQFFFTL R +EL  KHTIFGKVTG+T+YNM+R +++++D ++RP +P KI   E+L NPF+DI PR+ K+ K++    +    K K K TKN+ LLSFGEEAE++E   N    +     KSSHD+LK+D  LS+ P V+             E+     D+ +D    ++ R    KKLKKDT  +                GE E EKK   R + L++EA+QLK+EL +      +   KQ     ++++ P +  + +   E+ +Y+  +K++   +KG  R+ +TLALL  F+S +   I E   N+  ET  E +DDEGW++H L+FE        KDA+M+  D ++IYDPRNP+N+RRRE+SKK  +  K  R
Sbjct:    1 MSNIYIQEPPTNGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVTGDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFNPFDDIIPREIKRLKKE--KPEEEVKKLKPKGTKNFSLLSFGEEAEEEEEEVNRVSQSMKGKSKSSHDLLKDDPHLSSVPVVESEKGDAPDLVDDGEDESAEHDEYIDGDEKNLMRERIAKKLKKDTSANVKSA------------GEGEVEKKSVSRSEELRKEARQLKRELLAAKQKKVENAAKQAEKRSEEEEAPPDGAVAEYRREKQKYEALRKQQS--KKGTSREDQTLALLNQFKSKLTQAIAETPENDIPET--EVEDDEGWMSHVLQFEDKSR--KVKDASMQDSDTFEIYDPRNPVNKRRREESKKLMREKKERR 472

The following BLAST results are available for this feature:

BLAST of TCONS_00030102-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00030102-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CWC27	6.528e-145	49.39	Peptidyl-prolyl cis-trans isomerase CWC27 homolog ...	[more]

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TCONS_00030102-protein (polypeptide) - C. hemisphaerica