TCONS_00029663-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00029663-protein
Unique NameTCONS_00029663-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length741

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00029663-protein ID=TCONS_00029663-protein|Name=TCONS_00029663-protein|organism=Clytia hemisphaerica|type=polypeptide|length=741bp
MTNKIKKRERNHDNPTENDVILLDDYVPVPRLSINQASIIVILTSCLCFW
KCQYAEFTFDDNSAILSNKDVSAETPLWSILENDFWGTKMSSKLSHKSYR
PLTVLTYRVNYILSGGYHPWSFHVVNLVLHSLNCVLLLRVFSLFFGGVSD
NDIGDFKAPRRSLLATLLFTVHPVHTESVAAVVGRADLICSIFFNFSLLF
YIKHSYEDQQAGWKGRKITFIVSMLCAIIAMFSKEQGITVLGVCLAYDVI
MVLRLNLDVLKKKCFESVIDLPSIIKRMVIVCIIAFGLLVIRLNIMGNVP
PSFQKMDNPASFHPSLIFRVFNYIYLYSINVWLLLAPYWLCFDWAMGCIP
VITSYDDVRLLFPLLLVVGVTLLLMKIIFNLDRPSGRLLMMSFCLLVIPF
LPAMNIFFRVGFVIAERNLYIPSIGFSMLIVHGVNAICKSSAGRKISKIG
IACVMVIFISRTINRTNNWLTEESLFKSGEEVCPLNAKVHYNIGKVSQDK
NELDNAIRYYKNAIRLSPEYDQPMNNLGNILKDMKQYKEAEFYLQNAVNV
TPKFATGWMNLGIVKAEMNKNDEANECYSKAVLHRRNYPDAYYNWGNMFL
ALKKHQEALEKFEKAISLKHDHLQAWQNKINLLCEMKANEDLLKGIQKMA
SIFPTNDQLMYLAGNSLGRVGNFKESKNYLLRTIKLNQRNYEAHGALGAV
YHHTKDYKEAEKHYKISLSINPNHQGTIANYKKLQKTMQKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016955XLOC_016955Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00029663TCONS_00029663Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013618DUF1736
IPR001440TPR_1
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 589..622
e-value: 3.7E-6
score: 36.5
coord: 657..690
e-value: 64.0
score: 7.9
coord: 691..724
e-value: 2.6E-6
score: 36.9
coord: 555..588
e-value: 0.29
score: 20.2
coord: 487..520
e-value: 1.6E-5
score: 34.3
coord: 521..554
e-value: 0.17
score: 20.9
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 524..553
e-value: 0.0015
score: 18.5
coord: 487..519
e-value: 1.1E-4
score: 22.0
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 691..724
score: 11.004
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 555..588
score: 7.729
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 657..690
score: 6.549
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 521..554
score: 8.024
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 589..622
score: 11.653
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 487..520
score: 11.594
NoneNo IPR availableGENE3D1.10.287.1110coord: 609..620
e-value: 1.2E-5
score: 24.5
NoneNo IPR availableGENE3D1.20.58.280coord: 543..568
e-value: 1.0E-8
score: 34.5
NoneNo IPR availablePFAMPF13432TPR_16coord: 661..723
e-value: 2.6E-6
score: 27.8
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 569..608
e-value: 2.3E-13
score: 49.4
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 462..542
e-value: 1.4E-15
score: 56.8
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 621..741
e-value: 4.7E-21
score: 74.6
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 477..520
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 518..724
IPR013618Domain of unknown function DUF1736PFAMPF08409DUF1736coord: 300..369
e-value: 2.3E-28
score: 97.9
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 589..622
e-value: 2.5E-7
score: 30.1
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 487..724
score: 49.211

Blast
[Close]
BLAST of TCONS_00029663-protein vs. Swiss-Prot (Human)
Match: TMTC4 (Transmembrane and TPR repeat-containing protein 4 OS=Homo sapiens GN=TMTC4 PE=2 SV=2)

HSP 1 Score: 590.112 bits (1520), Expect = 0.000e+0
Identity = 323/733 (44.07%), Postives = 449/733 (61.26%), Query Frame = 0 
Query:   23 LDDYVPVPRLSINQASIIVILTSCLCFWKCQYAEFTFDDNSAILSNKDVSAETPLWSILENDFWGTKMSSKLSHKSYRPLTVLTYRVNYILSGGYHPWSFHVVNLVLHSLNCVLLLRVFSLFFGGVSDNDIGD--FKAPRRSLLATLLFTVHPVHTESVAAVVGRADLICSIFFNFSLLFYIKHSYEDQQAGWKGRKITFIVSMLCAIIAMFSKEQGITVLGVCLAYDVIMVLRLN-LDVLKK-----KCFESVIDL--PSIIKRMVIVCIIAFGLLVIRLNIMGNVPPSFQKMDNPASFHPSLIFRVFNYIYLYSINVWLLLAPYWLCFDWAMGCIPVITSYDDVRLLFPLLLVVGVTLLLMKIIFNLDRPSGRLLMMSFCLLVIPFLPAMNIFFRVGFVIAERNLYIPSIGFSMLIVHGVNAICKSSAGRKISKIGIACVMVIFISRTINRTNNWLTEESLFKSGEEVCPLNAKVHYNIGKVSQDKNELDNAIRYYKNAIRLSPEYDQPMNNLGNILKDMKQYKEAEFYLQNAVNVTPKFATGWMNLGIVKAEMNKNDEANECYSKAVLHRRNYPDAYYNWGNMFLALKKHQEALEKFEKAISLKHDHLQAWQNKINLLCEMKANEDLLKGIQKMA-SIFPTNDQLMYLAGNSLGRVGNFKESKNYLLRTIKLNQRNYEAHGALGAVYHHTKDYKEAEKHYKISLSINPNHQGTIANYKKLQKT---MQKK 741
            LD  +P   L    A ++V   + +CF +    +F FDD+ AI++NKD+ AETPL  +  +DFWG+++SS  SHKSYRPLTVLT+R+NY LSGG+HP  FHVVN++LHS   VL++ VFS+ FGG+     G     APR SLLA LLF VHPVHTE VA VVGRADL+C++FF  S L Y K   E  + G        ++S+    +AM  KEQGITVLG+   +D++++ + N L++++K     K  E++  L    ++ RM ++     G+L +R  IMG  PP+F ++DNPASF  S++ R  NY Y YS+N WLLL P+WLCFDW+MGCIP+I S  D R++    L   +  L+ + + + D    R+L +    LVIPFLPA N+FFRVGFV+AER LY+PS+G+ +L+  G  A+ K +  +K+    +  ++ I   R + R+  W +EE LF+S   VCPLNAKVHYNIGK   DK     AIRYY+ A+RL+P+Y   MNNLGNILK+  + +EAE  L  AV + P FA  WMNLGIV+  + + + A + Y  A+ HRR YPD YYN G ++  L +H +AL  +  A  LK +H  AW N I LL +   N    + + + A  + P +  LM+   N LG+   +KES+   L+ IK N      HG L  +YH       A+KHY+ISL ++P   GT  NY  L++    MQKK
Sbjct:    8 LDHILPSSVLPPFWAKLVVGSVAIVCFARSYDGDFVFDDSEAIVNNKDLQAETPLGDLWHHDFWGSRLSSNTSHKSYRPLTVLTFRINYYLSGGFHPVGFHVVNILLHSGISVLMVDVFSVLFGGLQYTSKGRRLHLAPRASLLAALLFAVHPVHTECVAGVVGRADLLCALFFLLSFLGYCKAFRESNKEGAHSSTFWVLLSIFLGAVAMLCKEQGITVLGLNAVFDILVIGKFNVLEIVQKVLHKDKSLENLGMLRNGGLLFRMTLLTSGGAGMLYVRWRIMGTGPPAFTEVDNPASFADSMLVRAVNYNYYYSLNAWLLLCPWWLCFDWSMGCIPLIKSISDWRVIALAALWFCLIGLICQALCSEDGHKRRILTLGLGFLVIPFLPASNLFFRVGFVVAERVLYLPSVGYCVLLTFGFGALSKHTKKKKLIAAVVLGILFINTLRCVLRSGEWRSEEQLFRSALSVCPLNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQPDFAAAWMNLGIVQNSLKRFEAAEQSYRTAIKHRRKYPDCYYNLGRLYADLNRHVDALNAWRNATVLKPEHSLAWNNMIILL-DNTGNLAQAEAVGREALELIPNDHSLMFSLANVLGKSQKYKESEALFLKAIKANPNAASYHGNLAVLYHRWGHLDLAKKHYEISLQLDPTASGTKENYGLLRRKLELMQKK 739
The following BLAST results are available for this feature:
BLAST of TCONS_00029663-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TMTC40.000e+044.07Transmembrane and TPR repeat-containing protein 4 ... [more]
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