TCONS_00029221-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00029221-protein
Unique NameTCONS_00029221-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length308

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00029221-protein ID=TCONS_00029221-protein|Name=TCONS_00029221-protein|organism=Clytia hemisphaerica|type=polypeptide|length=308bp
IRLDISFELLIRLVKMVFKYKQKCRPHFYLKEKRRKELKIMRVVTVNGRA
FYFEAKPKEPPDNDGYFAEQTEHQHQEPPRLTEEDEYFAKRIEETQLTLE
EYTRQTILQNEEYFTDSDVEDPPLREDEYFTERNNHDREIDAFPNTNQPE
SNIQLDFVLEHNKRRALHHNTPPLKWNQDLADGAQKWAEKLIKEHDGKLM
HCKERGNDVGENLFVAMSTETHDESDLAVKTLDKWYGEIKDYNFSKSTYT
SKAGHFSQVVWAGSQQMGVGYAQRKIGQFNTVVVCGRYHPAGNMNMEGYF
KNNVFPPK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016637XLOC_016637Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00029221TCONS_00029221Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR014044CAP_domain
IPR018244Allrgn_V5/Tpx1_CS
IPR034113SCP_GAPR1-like
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 231..244
score: 29.47
coord: 283..296
score: 33.08
coord: 253..269
score: 41.92
coord: 174..192
score: 34.13
IPR014044CAP domainSMARTSM00198SCP_3coord: 152..296
e-value: 1.0E-28
score: 111.4
IPR014044CAP domainPFAMPF00188CAPcoord: 161..285
e-value: 1.1E-20
score: 74.6
IPR014044CAP domainGENE3D3.40.33.10coord: 108..303
e-value: 9.0E-37
score: 126.4
IPR014044CAP domainSUPERFAMILY55797PR-1-likecoord: 145..307
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 254..264
IPR034113Golgi-associated plant pathogenesis-related protein 1, SCP domainCDDcd05382SCP_GAPR-1_likecoord: 154..294
e-value: 2.39282E-47
score: 156.216

Blast
[Close]
BLAST of TCONS_00029221-protein vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.156e-24
Identity = 60/148 (40.54%), Postives = 80/148 (54.05%), Query Frame = 0 
Query:  161 HNKRRALHHNTPPLKWNQDLADGAQKWAEKLIKEHDGKLMHCKERGNDVGENLFVAMSTETHDESDLAVKTLDKWYGEIKDYNFSKSTYTSKAGHFSQVVWAGSQQMGVGYAQRKIGQFNTVVVCGRYHPAGNMNMEGYFKNNVFPPK 308
            HN+ R   H  PPLK  ++L   AQ+++E L      K      RG   GENL  A   +T  E        D+WY EIK+YNF +  +TS  GHF+ +VW  +++MGVG A    G   +  V  RY PAGN+  EG+F+ NV PPK
Sbjct:   17 HNEYRQ-KHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRG-QCGENLAWASYDQTGKE------VADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKASASDG---SSFVVARYFPAGNVVNEGFFEENVLPPK 153
The following BLAST results are available for this feature:
BLAST of TCONS_00029221-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAPR11.156e-2440.54Golgi-associated plant pathogenesis-related protei... [more]
back to top