TCONS_00028903-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028903-protein
Unique NameTCONS_00028903-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length219

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028903-protein ID=TCONS_00028903-protein|Name=TCONS_00028903-protein|organism=Clytia hemisphaerica|type=polypeptide|length=219bp
MATLLKTISHTGLLLSSFIGLCFGNYKVSGWIFKTCGTNIWDFVPVLLLF
LTVTSLTVYLFVVCLLRLYYTRVLRSIQSLNLVEFSFMMSKLQQMEYRRA
LASDISNINTDNLCLVCYEFQPRTFTLPCQHQVMCGSCAWRYIATCLRDH
ASFRCILCRTEVTEFKGDITVMLNKLNIGQLSSLVSNTNKTTSYKTSNVV
SLSTTFFNLPLSEGQNCQQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016412XLOC_016412Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028903TCONS_00028903Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.1170.10coord: 72..167
e-value: 4.5E-8
score: 33.0
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 111..164
e-value: 1.2E-8
score: 34.5
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 113..166
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 114..159
score: 8.949

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028903-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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