TCONS_00028796-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028796-protein
Unique NameTCONS_00028796-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length243

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028796-protein ID=TCONS_00028796-protein|Name=TCONS_00028796-protein|organism=Clytia hemisphaerica|type=polypeptide|length=243bp
MIAGAPDPTGGASAFEDAKWVLDEASLQENIKKILARFCGTLPYVMMDSN
AAFLNSVPPVSQEWSNLLRSFQGNDPEALWNLLNISRHLYAKGDRNAAHL
LHLITEECLLSYQMMFYWMLSYNSTSNQHAAIGRGRPEPPHMSLPSTHVL
SRHASAHLMEEIVHLWELTVMSPYLDKDTKLQMKLKFEIWNQQVIESGRK
GQGQGIAFNSRMIKDFPGFNGPLEAAEIDWDVFYQVLGIPQSE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016330XLOC_016330Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028796TCONS_00028796Clytia hemisphaericatranscript
Blast
[Close]
BLAST of TCONS_00028796-protein vs. Swiss-Prot (Human)
Match: ZSWM8 (Zinc finger SWIM domain-containing protein 8 OS=Homo sapiens GN=ZSWIM8 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 3.404e-46
Identity = 86/239 (35.98%), Postives = 134/239 (56.07%), Query Frame = 0 
Query:    2 IAGAPDPTGGASAFEDAKWVLDEASLQENIKKILARFCGTLPYVMMDSNAAFLNSV-PPVSQEWSNLLRSFQGNDPEALWNLLNISRHLYAKGDRNAAHLLHLITEECLLSYQMMFYWMLSYNSTSNQHAAIGRGRPEPPHMSLPSTHVLSRHASAHLMEEIVHLWELTVMSPYLDKDTKLQMKLKFEIWNQQVIESGRKGQGQGIAFNSRMIKDFPGFNGPLEAAEIDWDVFYQVLGI 239
            + GAPDPT G SA + + W LDE++L +NIKK L +FCG  P V  D N+ +L+S  PP + EW+ LLR  +G +PE +WNLL+I R ++ + D NAA LL ++T++CL   Q+  +W     S S+  A+   GR             ++ HA A + +E+V LW L V+ P L    + ++  +   W  +VIE+ ++GQ         + + FPGF   +EA   +W+  Y + G+
Sbjct:  269 VCGAPDPTAGPSASDQSTWYLDESTLTDNIKKTLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKRRDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSN-------GQSEVAAHACASMCDEMVTLWRLAVLDPALSPQRRRELCTQLRQWQLKVIENVKRGQ-----HKKTLERLFPGFRPAVEACYFNWEEAYPLPGV 495
The following BLAST results are available for this feature:
BLAST of TCONS_00028796-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZSWM83.404e-4635.98Zinc finger SWIM domain-containing protein 8 OS=Ho... [more]
back to top