TCONS_00028358-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028358-protein
Unique NameTCONS_00028358-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length903

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028358-protein ID=TCONS_00028358-protein|Name=TCONS_00028358-protein|organism=Clytia hemisphaerica|type=polypeptide|length=903bp
MDVSTSCSGLESMNEDSDENKLEITRNPFDSNLYEKDNFPVLDASVFTDS
RRSSEHQESPASSFRWSIDQMAKLQPADLDMFPNQEYSVAYERKEDEERD
QQQVDEYFKNVLLPSPWLDNRAEFLKRVTFSPHPPATRYINNNENDDSEL
SSTSDDVADGVVKGSRRDAGCQTTLTLPFDFDLMALIGAQYYTYVNETIH
VGSTNASIASSSSLRRKLFDQETNSGTNGTPVRHGLKSLDINTPGYVTSS
PTSSSGDSRTPSLCLNNKEIGAIANNLNSSNVEMNESNFFGAVGGPGGCS
STECSPIKQASNVGTPIGKRQDISFSSVDVSPISSCEKDPTKKRTSSLEE
DAVESFSFLPDVTVDPDALEESVFESSRAARFASPDISPIGKTAAQGLES
MENITNPLQQQSIKESTARNLHAFSGLEFSSIVESTSLLSKLDDVQEDKG
PLDITELEPDDEEQDVVLTNDQTDVKTEDNNSPPLKLGDLERETVETPKP
EKPTNSAKMDQDEDPAPTPKIILTPTTPNRSQLVATPLKGILKHREVPSS
SGKSKENSVEETKFNTERNTGRARSRILQSLTGSTNLPRPILIGSPSTGD
SNDDVSPSPIENDEQFKWSWPRGENVSFGDEFVCRRALSAMKRSLKVSSY
LEEEIFDKENSSPFQSTTTKQRRKYQLNSTAVASGSGSSSSMLRPLDFAK
ISTDDVFEEGRTDSGVSSMDWVSDPNLFRAKLTSSGDAATVPVTPKNDLK
SFSISPVMNLRELHLRNGNTPGALSANKKNVRSPYVYRASPFLNRSGCSL
QSPMSRASAQSNRSLIYDRSHSWPTKGYPHQQRSTNSRFSSLISPPSSYN
MNRSKDFIPRSRVTPTHVTRSKSFTWRSTKDQSVFKTLDIGSSYKDFLPS
PLK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016071XLOC_016071Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028358TCONS_00028358Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023252Aurora_borealis_protein
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023252Aurora borealis proteinPRINTSPR02038AURORABORAcoord: 64..83
score: 43.64
coord: 211..223
score: 65.03
IPR023252Aurora borealis proteinPFAMPF15280BORA_Ncoord: 23..228
e-value: 3.9E-34
score: 118.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 823..845
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 448..615

Blast
[Close]
BLAST of TCONS_00028358-protein vs. Swiss-Prot (Human)
Match: BORA (Protein aurora borealis OS=Homo sapiens GN=BORA PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.281e-16
Identity = 69/223 (30.94%), Postives = 110/223 (49.33%), Query Frame = 0 
Query:   16 DSDENKLEIT---------RNPFDS-----NLYEKDNFPVLDASVFTDSRRSSEHQESPASSFRWSIDQMAKLQPADLDM--FPNQEYSVAYER--KEDEERDQQQVDEYF-KNVLLPSPWLDNRAEFLKRVTFSPHPPATRYINNNENDDSELSSTSDDVADGVVKGSRRDAGCQTTLTLPFDFDLMALIGAQYYTYVNETIHVGSTNASIASSSSLRRKLF 219
            D  E+K++IT          NPF+S     NL+E+    +   SVF  ++  +         FRWSIDQ+A + P ++D      Q   +++ R  K+ E++ Q+ ++E+F K+V++PSPW D+  + L +     H      IN++     +L+          +   + DA CQT L+LP DF+L  ++G   Y   +E       N    SSSSLRRKLF
Sbjct:    3 DVKESKMQITPETPGRIPVLNPFESPSDYSNLHEQT---LASPSVFKSTKLPT------PGKFRWSIDQLAVINPVEIDPEDIHRQALYLSHSRIDKDVEDKRQKAIEEFFTKDVIVPSPWTDHEGKQLSQC----HSSKCTNINSDSPVGKKLT----------IHSEKSDAACQTLLSLPVDFNLENILGD--YFRADEFADQSPGN---LSSSSLRRKLF 197
The following BLAST results are available for this feature:
BLAST of TCONS_00028358-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BORA3.281e-1630.94Protein aurora borealis OS=Homo sapiens GN=BORA PE... [more]
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