TCONS_00028183-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00028183-protein
Unique Name	TCONS_00028183-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	680

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00028183-protein ID=TCONS_00028183-protein|Name=TCONS_00028183-protein|organism=Clytia hemisphaerica|type=polypeptide|length=680bp
MGTRNDEADTSPGEGGSEENQPLMQDVEGGGGDQPQEEEEEEDFKLLNTE
DRKAMGLCCPQVNRQLLLSKGYYFCFFSAWGSLLPYLALYFKQLMLTPSQ
VGVIMGLKPFVQFLATPVWGALVDKFHIHRFALVISMIALITSTFALSLV
PGPKQQPIILEKHCNRTDRDMNDEMSSLVGEPEIDKMVLNDNTQDYYFSK
DPDPWPLDFITNLSEEIYQKYKIDATQTFTSLFLITLFGNVIASPALALV
DTATLTMLGKESHRYGKQRLTGSLGWGMGAFIVGASLKTTHRCAISKNRE
VVDFIPSFYVFAVLMSLGLIISLKLHFNAKKKAAQKRSLSVGLVALKQPT
YLMFLFTALYLGFLMAFIKTFLFWHLKDLGGTQLLFSVISAVNCVAEVSM
YFLSERLIKKIGEVRVLYLGLLCYSVRLFYYAVIPNTWMVLAVELLPGIT
TAAVWAACLSYVSKNSRPGAQTTMQCILHGVHWGLGYGAGEVIGGILVHH
YGAPKTFVLFGCLCIVIFFIYLLINYIWRNSEGIPPPAEEARERGDESKE
TVEGDKDNNKETPSSEDKQTEENAAPAAEESAQQASPPPDNNVQEGEDEQ
NKNEDKDSESAVDKDADSQQNDKNNEVFHEEGASNEALESDEAIDRQSPV
GEENIAVVGEDDGDEQSAKDKPSSNPTTEL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_015952	XLOC_015952	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00028183	TCONS_00028183	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024989	MFS_assoc_dom
IPR020846	MFS_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024989	Major facilitator superfamily associated domain	PFAM	PF12832	MFS_1_like	coord: 70..508 e-value: 2.3E-94 score: 316.3
None	No IPR available	GENE3D	1.20.1250.20		coord: 35..324 e-value: 6.2E-26 score: 90.4 coord: 325..587 e-value: 4.0E-21 score: 74.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 537..680
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 73..524 e-value: 4.41349E-23 score: 99.3104
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 63..151 coord: 224..529

Blast

[Close]

BLAST of TCONS_00028183-protein vs. Swiss-Prot (Human)
Match: MFSD6 (Major facilitator superfamily domain-containing protein 6 OS=Homo sapiens GN=MFSD6 PE=1 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 1.625e-65
Identity = 124/348 (35.63%), Postives = 191/348 (54.89%), Query Frame = 0

Query:  217 IYQKYKIDATQTFTSLFLITLFGNVIASPALALVDTATLTMLGKESHRYGKQRLTGSLGWGMGAFIVGASLKTTHRCAI-----SKNREVVDFIPSFYVFAVLMSLGLIISLKLHF---NAKKKAAQKRSLSVGLVALKQPT-----------------------------YLMFLFTALYLGFLMAFIKTFLFWHLKDLGGTQLLFSVISAVNCVAEVSMYFLSERLIKKIGEVRVLYLGLLCYSVRLFYYAVIPNTWMVLAVELLPGITTAAVWAACLSYVSKNSRPGAQTTMQCILHGVHWGLGYGAGEVIGGILVHHYGAPKTFVLFGCLCIVIFFIYLLINYI 527
            +Y + +++A   F  + ++ + G   ++ ++ +VDT TL  LGK   RYG QR+ GSLGWG+    VG  +  TH   +      K  E  ++   F VF VLM++ LI++ +  F   + K   ++ + + +  V     T                             Y   LF A ++GF   F+ TFL+WHL+DL GT  LF V S ++ V+E++ YF S +LI+ IG +RVLY+GL C + R  Y + + N W VL +E+L G+T AA+WAAC+SY+S    P  +T+ Q IL G+H GLG G G +IGG+LV+++GA  TF   G  C+VI  ++ LI ++
Sbjct:  278 VYDQQEVEAI--FLVILVVVIIGEFFSASSVTIVDTVTLQYLGKHRDRYGLQRMWGSLGWGLAMLSVGIGIDYTHIEVLIDGKGCKPPEYRNYQIVFIVFGVLMTMALIVATQFRFRYNHFKNDDSKGKEVEIPQVERNNSTESSEETPTTTSHSQAFNFWDLIKLLCSVQYGSVLFVAWFMGFGYGFVFTFLYWHLEDLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIGHIRVLYIGLACNTARYIYISYLENAWTVLPMEVLQGVTHAAIWAACISYLSAAVPPELRTSAQGILQGLHLGLGRGCGAMIGGVLVNYFGAAATFRGIGMACLVILLLFALIQWL 623

HSP 2 Score: 87.4261 bits (215), Expect = 9.886e-18
Identity = 35/92 (38.04%), Postives = 61/92 (66.30%), Query Frame = 0

Query:   59 CPQVNRQLLLSKGYYFCFFSAWGSLLPYLALYFKQLMLTPSQVGVIMGLKPFVQFLATPVWGALVDKFHIHRFALVISMIALITSTFALSLV 150
            C ++N  LL+SK +YF F+SA+GSL P L +Y+KQL ++PSQ G+++G++ F++F + P WG + D+F   +  L+ S++  +     +  V
Sbjct:   61 CVKINNDLLISKVFYFFFYSAYGSLYPLLPVYYKQLGMSPSQSGLLVGIRYFIEFCSAPFWGVVADRFKKGKIVLLFSLLCWVLFNLGIGFV 152

The following BLAST results are available for this feature:

BLAST of TCONS_00028183-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00028183-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MFSD6	1.625e-65	35.63	Major facilitator superfamily domain-containing pr...	[more]

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TCONS_00028183-protein (polypeptide) - C. hemisphaerica