TCONS_00028149-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028149-protein
Unique NameTCONS_00028149-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length666

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028149-protein ID=TCONS_00028149-protein|Name=TCONS_00028149-protein|organism=Clytia hemisphaerica|type=polypeptide|length=666bp
FDEKNLNALIDARNEAMRRVFNKRTRFSEERLRLLRTKVRSAKNKWLHYI
SHATNVTVGTKTAWDNVKLLKKGLSKVKPVTQKQLKKPDGTLCKTPDENA
TVFKDHFQKLYENQVNFDETVLDLLSQRPVFENCDEIPSDEEIRTAISKL
KNKAPGESGVMTQSWKIIIDSQEIFQILKSIITDFWVTETVPKEWNIGRL
NVLPKKGDLSLPKNYRGIMLLENAYKIIAIILHRRLLPIEESLDHESQSG
FRPGRGCMDAVFTVKTAIKKRREHGLETWILFLDLVKAFDRVPRIALWKV
LEKYGVPLKLINLLIVLHADFTVKFVIGDVVRTINSIVGVKQGDILGPLL
FTFYITAMIETWKLSCGIPFCIFRSKSDFVMTGRRTTTKGEDFELPDSEY
ADDTALLFESRDHIQQGATSIIVHFDRFGMEIHTGAINPKSDSKTEILFC
AKPIFMYDNPETLDNVDLSDVIIDEKRYLPIVDEFCYLGSIVTNDCTDEK
DVDTRIAKASGAFGMLRKCLFASSDITNKAKGSIFRSLILPILLYGSECW
CMTESLLRKIRSFYHGCIRSMCRVNRKHTFLHRISTDELLERVGLESIET
YIYRQQLRWIGHVSRMDWDRLPRKMLSSWVVSKRPRGCPKMTYGRSIRKC
MSKCGINVDNWFVMAX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015931XLOC_015931Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028149TCONS_00028149Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 253..489
e-value: 9.9E-18
score: 63.9
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 198..492
e-value: 5.99241E-44
score: 155.912
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 396..457
coord: 94..369
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 204..433
e-value: 9.3E-32
score: 110.2
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 184..454
score: 14.943

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028149-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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