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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00027713-protein ID=TCONS_00027713-protein|Name=TCONS_00027713-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1660bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00027713-protein vs. Swiss-Prot (Human)
Match: PTPRD (Receptor-type tyrosine-protein phosphatase delta OS=Homo sapiens GN=PTPRD PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 1.754e-31 Identity = 138/497 (27.77%), Postives = 213/497 (42.86%), Query Frame = 0
Query: 1141 YRTTD-LLTTSYNVTDLKMNTGYHFVLQVYNEFGLTLNCSNIFGVTQENIPYGPPINVSGNAINSTSITLVMKQPEEHLRNGVILGYQVTYWTSEDAHVSINITRSLDANETNVILWGLRKFFDHNITVRAFTKIGLGPASNVTVIKTLEDVPSAAPLNFTITTLSHDSFSLSWKQIPYLQQHSIMRNFTVTCGGMLANGTSHLIHDVSPAEESRQEYE----FSISQLFPNTAYDCMLDGCNTLGCGPKT-NTSNITFEYYPSGTVQSISQTSLEMKESLHINFTDLLVMDKKGNITKFNISL-------NKIENLWDTVNDTTKYFIIDGRTFELSMHGLDNFTEYEVSVTAYTLIGPGPTKNSVF-RTATNVPSGSPYITYLNNISSSAINVKFDALDKSWSEGPITGYVIYY-----------QLTEDLLHCDGADCLSMNGSCVNETTFDLNIDGLELWSNYSVWIAAQTEAGIGVQSQIWTVMTGAFVNGN 1612
Y+ D + TT Y+V L + Y F + N G + T E P P +V ++ST+I + K+PEE NG I GY+V Y HV+ N + A+ + L +++ V AFT IG GP S+ + T VP PLNF S S LSW + R+ T+ ++ H EE R E + + L PN+ Y L + G G T S T + PS Q IS TS S+ +++ V + G IT+++I +K + +DTTKY + L+ +TEY ++VTA+T +GPGP SV RT +VPSG P + ++S+++ V + + + G I GY ++Y + +D++ D + T D+ I GL+ ++YS+ + A T G G +S+ V T V G
Sbjct: 367 YKEIDGVATTRYSVAGLSPYSDYEFRVVAVNNIGRGPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEP--NGQIQGYRVYYTMDPTQHVN-NWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGVP-GQPLNFKAEPESETSILLSW---------TPPRSDTIANYELVYKDGEH-------GEEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSKPSAPPQDISCTS-PSSTSILVSWQPPPVEKQNGIITEYSIKYTAVDGEDDKPHEILGIPSDTTKYL----------LEQLEKWTEYRITVTAHTDVGPGPESLSVLIRTNEDVPSGPPRKVEVEAVNSTSVKVSWRSPVPNKQHGQIRGYQVHYVRMENGEPKGQPMLKDVMLADA------QWEFDDTTEHDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGK 826 HSP 2 Score: 106.686 bits (265), Expect = 8.301e-23 Identity = 120/479 (25.05%), Postives = 196/479 (40.92%), Query Frame = 0
Query: 1140 DYRTTDLLTTSYNVTDLKMNTGYHFVLQVYNEFGLTLNCSNIFGVTQENIPYGPPINVSGNAINSTSITLVMKQPEEHLRNGVILGYQVTYWTSEDAHVSINITRSLDANETNVILWGLRKFFDHNITVRAFTKIGLGPASNVTVIKTLEDVPSAAPLNFTITTLSHDSFSLSWKQIPYLQQHSIMRNFTVTCGGMLANGTSH---LIHDVSPAE-----ESRQEYEFSISQLFPNTAYDCMLDGCNTLGCGPKTNTSNITFEYYPSGTVQSISQTSLEMKESLHINFTDLLVMDKKGNITKFNISLNKIENLWDTVNDTTKYFIIDGR-------TFELSMHGLDNFT--------EYEVSVTAYTLIGPGPTKNSVFRTATNVPSGSPYITYLNNISSSAINVKFDALDKSWSEGPITGYVIYYQLTEDLLHCDGADCLSMNGSCVNETTFDLNIDGLELWSNYSVWIAAQTEAGIG 1595
+ R T TSY + LK N+ Y+F L + GL + + I T ++ P PP ++S + +STSI + + P +NG+I Y + Y + + + ++ T +L L K+ ++ ITV A T +G GP S +I+T EDVPS P + ++ S +SW+ +QH +R + V M NG ++ DV A+ + E++ IS L P T+Y + T G G ++ ++ +G V K L IN T + N +L + DT Y + GR T E S D+FT Y ++A +G G VP+G P + +S+++ + + + G IT Y + Y+ D+ L M V T + + GL+ + Y V + A T G G
Sbjct: 559 EQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPSSTSILVSWQPPPVEKQNGIITEYSIKYTAVDGEDDKPHEILGIPSDTTKYLLEQLEKWTEYRITVTAHTDVGPGPESLSVLIRTNEDVPSGPPRKVEVEAVNSTSVKVSWRSPVPNKQHGQIRGYQVHYVRM-ENGEPKGQPMLKDVMLADAQWEFDDTTEHDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVST----TGAVPG--------KPRLVINHTQM------------NTALIQWHPPVDTFGPLQGYRLKFGRKDMEPLTTLEFS-EKEDHFTATDIHKGASYVFRLSARNKVGFGEEMVKEISIPEEVPTGFPQNLHSEGTTSTSVQLSWQPPVLAERNGIITKYTLLYR---DI----NIPLLPMEQLIVPADT-TMTLTGLKPDTTYDVKVRAHTSKGPG 1003 HSP 3 Score: 90.1225 bits (222), Expect = 9.540e-18 Identity = 94/369 (25.47%), Postives = 159/369 (43.09%), Query Frame = 0
Query: 1148 TTSYNVTDLKMNTGYHFVLQVYNEFGLTLNCSNIFGVTQENIPYGPPINVSGNAINSTSITLVMKQPEEHLRNGVILGYQVTYWTSEDAHVS-------INITRSL----DANETNVILWGLRKFFDHNITVRAFTKIGLGPASNVTVIKTLEDVPSAAPLNFTITTLSHDSFSLSWKQIPYLQQHSIMRNFTVTCGGMLANGTSHLIHDVSPAEESRQEYEFSISQLFPNTAYDCMLDGCNTLGCGPKTNTSNITFEYYPSGTVQSISQTSLEMKESLHINFTDLLVMDKKGNITKF-------NISLNKIENLWDTVNDTTKYFIIDGRTFELSMHGLDNFTEYEVSVTAYTLIGPGPTKNSV-FRT 1497
TT Y + L+ T Y + + + G ++ T E++P GPP V A+NSTS+ + + P + ++G I GYQV Y E+ + + + D E ++I+ GL+ +++TV A+T G G S ++ T VP L ++H + + +Q H + F G L G + ++ E S +E F+ + + +Y L N +G G + E P+G Q++ + S+ +++ ++ ++ G ITK+ NI L +E L DTT +++ GL T Y+V V A+T GPGP SV FRT
Sbjct: 669 TTKYLLEQLEKWTEYRITVTAHTDVGPGPESLSVLIRTNEDVPSGPPRKVEVEAVNSTSVKVSWRSPVPNKQHGQIRGYQVHYVRMENGEPKGQPMLKDVMLADAQWEFDDTTEHDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGKPRL-----VINHTQMNTA-----LIQWHPPVDTFGPLQGYRLKFGRKDM-EPLTTLEFSEKEDHFTATDIHKGASYVFRLSARNKVGFGEEMVKEISIPEEVPTGFPQNL-HSEGTTSTSVQLSWQPPVLAERNGIITKYTLLYRDINIPLLPMEQLI-VPADTT-----------MTLTGLKPDTTYDVKVRAHTSKGPGPYSPSVQFRT 1013 The following BLAST results are available for this feature:
BLAST of TCONS_00027713-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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