TCONS_00027587-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00027587-protein
Unique NameTCONS_00027587-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length630

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00027587-protein ID=TCONS_00027587-protein|Name=TCONS_00027587-protein|organism=Clytia hemisphaerica|type=polypeptide|length=630bp
MADPNTSESGETRVASRQNTDTSVAETDPNVQQNGDQQQQQPQESVWKTV
ITRIVTFWIIMQVVKSFTGQKGATSPDSPSSASGNVKGNNQPCSNLFKTN
DHLELYLYYSEKEDFTSFDAKSLLWHQGDIKFGSWYDGPDRDGSRKKTGK
IQASESLMNNGSLYYHIFVVKQGSSPDPRSKFYDKYSVSSQTKLMTSFRK
ERVHKTKNLLTGAADTQNKLVQNDTKAPLKVISFWHPNLTISLLDDQTPW
PKNGVPQPLDQYIKFDNIQNVYFPVVYVNDYWNYVSDYMPINDTTPELEF
QITFAPISMFKWQLYISQSMRSQWNQYLGDTAEQSDQEQDMIKRILRETN
PYLLALTMIVSLVHSVFEFLAFKNDIQFWKTRKSLEGLSVRSVFFNVFQT
LVVLLYVFDNETNTVVVISCFVGLIIECWKITKVVDIGRDPDRKWGPFPA
IKFEDKSTYVQSETREYDKLAFKYLSWGLFPLLACYAVYSLIYVEHKGWY
SFVLSIAYGFLLTFGFIMMTPQLFINYKMKSVAHLPWRMLTYKALNTFID
DIFAFVIKMPTLYRLGCLRDDIIFFIYLYQRWIYRTDMSRVNEFGTSGEE
PTETEKKDETQEAIAPHDEQEQNTETKKDR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015560XLOC_015560Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00027587TCONS_00027587Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008429CLPTM1
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008429Cleft lip and palate transmembrane 1PFAMPF05602CLPTM1coord: 49..493
e-value: 1.5E-150
score: 501.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 594..630
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..94

Blast
[Close]
BLAST of TCONS_00027587-protein vs. Swiss-Prot (Human)
Match: CLPT1 (Cleft lip and palate transmembrane protein 1 OS=Homo sapiens GN=CLPTM1 PE=1 SV=1)

HSP 1 Score: 655.981 bits (1691), Expect = 0.000e+0
Identity = 320/604 (52.98%), Postives = 421/604 (69.70%), Query Frame = 0 
Query:   15 ASRQNTDTSVAETDPNVQQNGDQQQQQPQESVWKTVITRIVTFWIIMQVVKSFTGQKGATSPDSPSSASGNVKGNNQPCSNLFKTNDHLELYLYYSEKEDFTSFDAKS-LLWHQGDIKFGSWYDGPDRDGSRKKTGKIQASESLMNNGSLYYHIFVVKQGSSPDPRSK-FYDKYSVSSQTKLMTSFRKERVHKTKNLLTGAADTQNKLVQN-DTKAPLKVISFWHPNLTISLLDDQTPWPKNGVPQPLDQYIKFDNIQNVYFPVVYVNDYWNYVSDYMPINDTTPELEFQITFAPISMFKWQLYISQSMRSQWNQYLGDTA-EQSDQEQDMIKRILRETNPYLLALTMIVSLVHSVFEFLAFKNDIQFWKTRKSLEGLSVRSVFFNVFQTLVVLLYVFDNETNTVVVISCFVGLIIECWKITKVVDIGRDPD-RKWGPFPAIKFEDKSTYVQSETREYDKLAFKYLSWGLFPLLACYAVYSLIYVEHKGWYSFVLSIAYGFLLTFGFIMMTPQLFINYKMKSVAHLPWRMLTYKALNTFIDDIFAFVIKMPTLYRLGCLRDDIIFFIYLYQRWIYRTDMSRVNEFGTSGEEPTETEKKDETQEA 613
            +S Q T       DP  +        QP  + W+ +   +   +II  +   F  ++G     +P   +G          NLF  +  + L++Y SE E FT F+A S L W Q D+ +G W  G + DG  +   ++   +S+  NGS+Y H++  K G  PDPR K  Y + +    ++++  +++ R  KTKNLLTG  +   ++++  +   P++VIS WHPN+TI+++DD TPW K  VP PLDQY+KFD +   Y+P++Y NDYWN   DY PIN++   L  +++F P+S+++WQLY +QS +S WN +LGD   EQSD+EQD +K  L ETNPYLLALT+IVS+VHSVFEFLAFKNDIQFW +R+SLEGLSVRSVFF VFQ+ VVLLY+ DNETN VV +S F+G++I+ WKITKV+D+  D + R  G FP + F+DKSTY++S T+ YD +AF+YLSW LFPLL CYAVYSL+Y+EHKGWYS+VLS+ YGFLLTFGFI MTPQLFINYK+KSVAHLPWRMLTYKALNTFIDD+FAFVIKMP +YR+GCLRDD++FFIYLYQRWIYR D +RVNEFG SGE+PT      E   A
Sbjct:   21 SSGQVTSNGSIGRDPPAETQPQNPPAQPAPNAWQVIKGVLFRIFIIWAISSWF--RRGP----APQDQAGPGGAPRVASRNLFPKDTLMNLHVYISEHEHFTDFNATSALFWEQHDLVYGDWTSGENSDGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQKALYRRLATVHMSRMINKYKRRRFQKTKNLLTGETEADPEMIKRAEDYGPVEVISHWHPNITINIVDDHTPWVKGSVPPPLDQYVKFDAVSGDYYPIIYFNDYWNLQKDYYPINESLASLPLRVSFCPLSLWRWQLYAAQSTKSPWN-FLGDELYEQSDEEQDSVKVALLETNPYLLALTIIVSIVHSVFEFLAFKNDIQFWNSRQSLEGLSVRSVFFGVFQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITKVMDVRLDREHRVAGIFPRLSFKDKSTYIESSTKVYDDMAFRYLSWILFPLLGCYAVYSLLYLEHKGWYSWVLSMLYGFLLTFGFITMTPQLFINYKLKSVAHLPWRMLTYKALNTFIDDLFAFVIKMPVMYRIGCLRDDVVFFIYLYQRWIYRVDPTRVNEFGMSGEDPTAAAPVAEVPTA 617
The following BLAST results are available for this feature:
BLAST of TCONS_00027587-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CLPT10.000e+052.98Cleft lip and palate transmembrane protein 1 OS=Ho... [more]
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