TCONS_00026708-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00026708-protein
Unique NameTCONS_00026708-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length196

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00026708-protein ID=TCONS_00026708-protein|Name=TCONS_00026708-protein|organism=Clytia hemisphaerica|type=polypeptide|length=196bp
KQIKMAANIDLDKISGEIENALTTDISEENKSKLSKIKDWFKERRSEVKP
WGEFFNTRKFVRPSNASEATSRLVSNVRVYQANYIMICMLMTFYCILTSP
LLLIGLTMSVGGCLYISTKGQGKTIKLFGKEFSTIQQYGLVFLICMPLFF
FASAGSTVFWIIGASMVIIGAHAVMLSASTTPTALDMEMEGVETMK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015017XLOC_015017Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00026708TCONS_00026708Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004895Prenylated_rab_accept_PRA1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004895Prenylated rab acceptor PRA1PFAMPF03208PRA1coord: 45..176
e-value: 1.0E-34
score: 119.1

Blast
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BLAST of TCONS_00026708-protein vs. Swiss-Prot (Human)
Match: PRAF1 (Prenylated Rab acceptor protein 1 OS=Homo sapiens GN=RABAC1 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.484e-40
Identity = 55/136 (40.44%), Postives = 85/136 (62.50%), Query Frame = 0 
Query:   38 KDWFKERRSEVKPWGEFFNTRKFVRPSNASEATSRLVSNVRVYQANYIMICMLMTFYCILTSPLLLIGLTMSVGGCLYISTKGQGKTIKLFGKEFSTIQQYGLVFLICMPLFFFASAGSTVFWIIGASMVIIGAHA 173
            ++W + RR+ ++PW  F + ++F RP N  E   RLV NV  YQ+NY+ + + +  YC++TSP+LL+ L +  G C  +  +     + LFG+E S   QY L   I  P F+ A AGS VFW++GA++V+IG+HA
Sbjct:   32 REWLERRRATIRPWSTFVDQQRFSRPRNLGELCQRLVRNVEYYQSNYVFVFLGLILYCVVTSPMLLVALAVFFGACYILYLRTLESKLVLFGREVSPAHQYALAGGISFPFFWLAGAGSAVFWVLGATLVVIGSHA 167
The following BLAST results are available for this feature:
BLAST of TCONS_00026708-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRAF13.484e-4040.44Prenylated Rab acceptor protein 1 OS=Homo sapiens ... [more]
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