TCONS_00026578-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00026578-protein
Unique NameTCONS_00026578-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length511

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00026578-protein ID=TCONS_00026578-protein|Name=TCONS_00026578-protein|organism=Clytia hemisphaerica|type=polypeptide|length=511bp
MATGYQEVLTSSIGSFGVAQFWISAASITPKITTAISMIMIGFSSSEPKW
YRENVVFNQTTNSTIVNQYAKSCTFGVNDTLNYNTPFETIVTEWRLICDE
SFIPTTIQTTQMVGVLFGSASFGQLGDLIGRKYCLQISQLLQIIALLIQG
LSYNWYMFICSSFLLGLGAGGFLVVTNIYMLEFIGTKWRTLCATFPAWGM
GVILFGALIKALPNWRHMCYLAAALNVPMVCISLFTPRSPRWLFTNGKAE
QGKEALVKLAKQNKNETPDFVLLEKLIDEETRKEKQSGSYTYMSLFKFSS
TRKKTLLLSYVWFCCGFSYYGLTLGIGTLSGDMAINYMFMGIGELLITLV
VIGSAKLFGRKYGSIILFVLSFLTSFSITISYFTTSDETFQSVMNWLALL
SRFFLAAAWGQVIVYTAEIYPTVIRSVGYGFVSVIARIGGIVAPQNKILF
NQSQHLPFTINGVLILISSLVILMLPETMNSPMADYIGENEEGEACNEES
NKRSNQVIPFN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014942XLOC_014942Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00026578TCONS_00026578Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005828MFS_sugar_transport-like
IPR005829Sugar_transporter_CS
IPR020846MFS_dom
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0022857 transmembrane transporter activity
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 275..506
e-value: 1.3E-17
score: 63.2
NoneNo IPR availableGENE3D1.20.1250.20coord: 7..254
e-value: 1.3E-20
score: 73.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 491..511
IPR005828Major facilitator, sugar transporter-likePFAMPF00083Sugar_trcoord: 66..483
e-value: 4.4E-31
score: 108.1
IPR005829Sugar transporter, conserved sitePROSITEPS00217SUGAR_TRANSPORT_2coord: 164..189
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 64..480
score: 15.695
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 106..476
e-value: 4.29625E-15
score: 74.2725
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 105..480

Blast
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BLAST of TCONS_00026578-protein vs. Swiss-Prot (Human)
Match: S22AF (Solute carrier family 22 member 15 OS=Homo sapiens GN=SLC22A15 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.961e-54
Identity = 148/503 (29.42%), Postives = 245/503 (48.71%), Query Frame = 0 
Query:   12 SIGSFGVAQFWIS-AASITPKITTAISMIMIGFSSSEP--KWYRENVVFNQTTNSTIVNQYA-KSCTFG----------VNDTLNYNTPFETIVTEWRLICDESFIPTTIQTTQMVGVLFGSASFGQLGDLIGRKYCLQISQLLQIIALLIQGLSYNWYMFICSSFLLGLGAGGFLVVTNIYMLEFIGTKWRTLCATFPA--WGMGVILFGALIKALPNWRHMCYLAAALNVPMVCISLFTPRSPRWLFTNGKAEQGKEALVKLAKQNKNETPDFVLLEKLIDEETRKEKQSGSYTYMSLFKFSSTRKKTLLLSYVWFCCGFSYYGLTLGIGTLSGDMAINYMFMGIGE-----LLITLVVIGSAKLFGRK--------YGSIILFVLSFLTSFSITISYFTTSDETFQSVMNWLALLSRFFLAAAWGQVIVYTAEIYPTVIRSVGYGFVSVIARIGGIVAPQNKILFNQSQHLPFTINGVLILISSLVILMLPETMNSPMAD 485
            ++G  G+ Q ++    ++  ++  A   I+I    + P   W    ++ NQ+      NQ A +   FG          ++  +++++ F +I +EW LI + S+  +   +    GV  G  SFGQL D  GRK        L I+  +  G S ++  F  + FL+G+  GG  +V  + + E +GT +  L  +     + +G+  +  L   + +WR +  L       +  +SLF P SPRWL++ G+  + +EAL  +AK+N+     F     L     R  +++GS  ++ LF++      TL+L ++WF C   YYGLTL  G L G +  N    G+ E     L I L+   + K FGRK         G +   ++ FL     T  +   +  +       L+LL +  ++AA+  V +YT+E+YPTVIR+VG G  S+ +R+GGI+AP    L      LPF + G   L S L+ L+LPET+NSP+ +
Sbjct:    9 AVGEMGIYQMYLCFLLAVLLQLYVATEAILIALVGATPSYHWDLAELLPNQSHG----NQSAGEDQAFGDWLLTANGSEIHKHVHFSSSFTSIASEWFLIANRSYKVSAASSFFFSGVFVGVISFGQLSDRFGRKKVYLTGFALDILFAIANGFSPSYEFFAVTRFLVGMMNGGMSLVAFVLLNECVGTAYWALAGSIGGLFFAVGIAQYALLGYFIRSWRTLAILVNLQGTVVFLLSLFIPESPRWLYSQGRLSEAEEALYLIAKRNRKLKCTF----SLTHPANRSCRETGS--FLDLFRYRVLLGHTLILMFIWFVCSLVYYGLTLSAGDLGGSIYANLALSGLIEIPSYPLCIYLI---NQKWFGRKRTLSAFLCLGGLACLIVMFLPEKKDTGVFAVVNSHS-------LSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGTCSMFSRVGGIIAPFIPSLKYVQWSLPFIVFGATGLTSGLLSLLLPETLNSPLLE 491
The following BLAST results are available for this feature:
BLAST of TCONS_00026578-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S22AF1.961e-5429.42Solute carrier family 22 member 15 OS=Homo sapiens... [more]
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