TCONS_00026532-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00026532-protein
Unique NameTCONS_00026532-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length360

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00026532-protein ID=TCONS_00026532-protein|Name=TCONS_00026532-protein|organism=Clytia hemisphaerica|type=polypeptide|length=360bp
MFNYLKGFYQRHKKKIITTGFLAVGTYAISKYVQWKYEEWEKEKVKEFTS
FTKKQYHFESNQRTCTMTFFSFLPEMRNTIAEHLDTETLLEALRSKPSNK
LEIWEQLKILSITRVICSVICSVTLLVILKVQLNVVGGYIFVQTSEKDES
TLSSEMSETQLNYMNNVRHFVLQCIPNLIQDCLKLVQAKFQDLSLKEKLS
HQRLRELLDEVMSELKGDATKEKHHLSKYMIDENFPKNEQTDEMYKKMTT
ETISLFESKDCSMVLNQCLDSSFDYVMDSLLDHFLGNEDPEAVVSLDNCV
KSSFYKQIELPIAKIIPLLNRQLDEIFRADSNGMLDVLFSQPHLRDFSSN
IYEAFSKKYD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014919XLOC_014919Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00026532TCONS_00026532Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006966Peroxin-3
Vocabulary: Biological Process
TermDefinition
GO:0007031peroxisome organization
Vocabulary: Cellular Component
TermDefinition
GO:0005779integral component of peroxisomal membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007031 peroxisome organization
cellular_component GO:0005779 integral component of peroxisomal membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006966Peroxin-3PFAMPF04882Peroxin-3coord: 8..98
e-value: 3.1E-13
score: 49.4
coord: 97..146
e-value: 2.6E-7
score: 29.9
coord: 184..352
e-value: 1.1E-17
score: 64.1

Blast
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BLAST of TCONS_00026532-protein vs. Swiss-Prot (Human)
Match: PEX3 (Peroxisomal biogenesis factor 3 OS=Homo sapiens GN=PEX3 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 6.023e-65
Identity = 129/374 (34.49%), Postives = 205/374 (54.81%), Query Frame = 0 
Query:    1 MFNYLKGFYQRHKKKIITTGFLAVGTYAISKYVQWKYEEWEKEKVKEFTSFTKKQYHFESNQRTCTMTFFSFLPEMRNTIAEHLDTETLLEALRSKPSNKLEIWEQLKILSITRVICSVICSVTLLVILKVQLNVVGGYIFVQTSE--KDESTLSSEMSETQLNYMNNVRHFVLQCIPNLIQDCLKLVQAKFQDLSLKEKLS----HQRLRELLDEV-----MSELKGDATKEKHHLSKYMI-DENFPKNEQT------DEMYKKMTTETISLFESKDCSMVLNQCLDSSFDYVMDSLLDHFLGNEDPEAVVSLDNCVKSSFYKQIELPIAKIIPLLNRQLDEIFRADSNGMLDVLFSQPHLRDFSSNIYEAFS 356
            M   +  F +RHKKK I  G +  G Y + KY Q K  E ++ +  E+ +  ++QYHFESNQRTC MT  S LP +R  + + L++E+L   L+++PSNKLEIWE LKI+S TR   +V  +  L+V+L+VQLN++GGYI++  +   K+ +T+ +   + Q  Y+++++H +   +  LI    + VQ     +SLK  LS     Q+L+E+ + V      S +  D +K    L  YM+ DE  P   Q       D    K+  ET  + ES D S VLN CL+  F  ++D++ + F   E       L +    +    + LP+AKIIP++N Q+  +     +  +  L +   ++DF++N+YEAFS
Sbjct:    1 MLRSVWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQEREAAEYIAQARRQYHFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNRPSNKLEIWEDLKIISFTRSTVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNGTTILAP-PDVQQQYLSSIQHLLGDGLTELITVIKQAVQKVLGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSSSWINKDGSKPL--LCHYMMPDEETPLAVQACGLSPRDITTIKLLNETRDMLESPDFSTVLNTCLNRGFSRLLDNMAEFFRPTEQ-----DLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSETPSHFVQDLLTMEQVKDFAANVYEAFS 366
The following BLAST results are available for this feature:
BLAST of TCONS_00026532-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PEX36.023e-6534.49Peroxisomal biogenesis factor 3 OS=Homo sapiens GN... [more]
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