TCONS_00026328-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00026328-protein
Unique NameTCONS_00026328-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2055

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00026328-protein ID=TCONS_00026328-protein|Name=TCONS_00026328-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2055bp
MTSRRGSTKKPWLVFAVILAIIQYINANVDSSSLSSSQSVSLSQFMSPSQ
SISESLSESQSQSMSQSQSMPPSQSMPPSQSISLSESMSPSQSMSPSESM
SPSQSISLSESMSPSQSMSMSESMSARQSISLSESMSPSQSMSQSQSMSQ
SQSTSQSQSISLSQSMSPSQSISPSESMSPSESMSQSQSISLSQSMSPIE
SLPPSQSMSPSQSMSPSQSMSPSQSMSPSQSMSPSQSMSQSQPMSPSQSM
SPSQSMSSSQSMSVSESMSQSQSMSPSQSMSVSESMSQSQSMSPSESLSP
SQSMSPSQSMSLSQSMSTSESMSPSQSMSPSQSMSPSQSMSPSQSMSPSQ
SMSPSQSMSPSQSISQGQSMSSSQSMSPSQSMSLSQSMSPSQSMSPSQSM
SPTQSMSQSQSMSASESMSPSQSMSPSKSMSPSQSMSQSQSTSQSQSMSP
SQSMSPSQSMSQSQSMSPSESLSPSQSMSSSQSLSPSESLSPSQSMSPSQ
SMSQSQSMSPSESLSPSQSMSSSQSLSPSESLSPSQTMSPSQSMSQSQSM
SPSQSMSHSQSMSPSQSMSPSQSMSQSQSTSQSQSMSPSQSMSPSESLSP
SQSMSSSQSLSPSESLSPSQSMSSSQSMSPSESLSPSQSMSSSQSLSPSE
SLSPSQSMSPSQSMSQSQSMAPSESLSPSQSMSLSQSMSPSESMSQSQSV
SPSESMSQSQSMSPSQSMSPSQSISQSQSMSSSQSMSPSQSMSPSQSMSP
SHSMSQSQSMSSSESMSPSQSMSLSQSMSLSQSMSPSQSMSPSHSMSPSQ
SMSLSQSMSLSQSMSPSQSMSPSHSMSQSQSMSLSESMSPSQSMSPSQSM
SSSQSMPSSQSMSPSQSISPSESMSQSQSMSPSHSMSQSQSMSSSESMSP
SQSMSSSQSMSLSQSMSLSQSMSPSQSMSPSHSMSQSQSMSLSESMSPSQ
SMSPSQSMSSSQSMSLSQSMSLSQSMSPSQSMSSSQSMSQSQLMSQSQSM
SPSESLSPSQSMSSSQSMSLSQSMSTSESMSLSQSLSSSQSMSQSQSVTP
SESMSQSQSMSPSQSISQSQSMSSSQSMSPSQSMSPSKSMSPSQSMSPSQ
SMSQSQSMSATESMPPSQSMSSSQSMSLSQSMSLSQSMSLSQSMSLSQSM
SPSESMSQSQSVSPSESMSPIQSMSPSQSMSQSQSMSQSQSMSKSQSMSP
SQSMSPSESMSQSQSMSHSQSMSPSQSMPSSQSMSPSQSISPSYSVSQSQ
SMSSSQSMSPSQSMSPSQSMSPSQSMSPSQSMSPSQSMSPSQSMSPSESM
SQSQSMSQSQSMSVSESMSASQSMLPSQSMSPGESMSPSQSMSVSESMSQ
SQSLSPSKSMSPSQSMSPSQSMSPSQSISPSQSMSPSQSMLPSQSMSPSQ
SMSVSESMSPSQSMSASQSMSPSQSMSPSQSMSPSQSMSVSESMSPSQSM
SASQSMSSSQSMSSSQSMSPSQSMSPSQSMSTSQSMSPSHSMSPSQSMSP
SQSMSPSQSMSPSQSISQGQSMSPSQSFVSGSSSMNIHPTVILPSSSSSQ
QVDTESTSIDLKPSPSSSELLPESTSMVIEPPIVSSSNIIQESSSAQVGQ
SSITQLGLSTSSVVELTSSSTSISPSSSPIISSKSSATLPTTSAIPSVPC
SLQCRVKVTIDGETNIATRIQNAITTTFENEMNFVSLRYLTIPESLIGDR
VKSGEDYYVPFTAVFENSSDCTGVDRTAVLNEGKRVFSDSTIEGVTFIKD
TFDIVPFTVEEQRQIKFDVQVKVNATYTKELEDKTTTQYKELETKMKDSL
ESFYKNIEGFIEVIIIRFTAGSIITDYQVVIDNEVNQDTDTSIKDDIEKI
TQDELDKPNATLAGLPVVEGSVEFGEYTNPQKSTGNQEDSGLDSWVIVLI
VACCLLLLLIYVIVHQRKKMRSYKQEIYMTKYISNGHYSPTKSNNRNGVP
DHDDIEMELTKVHDIVTDDSENHRAKLKSSSNSDTKLQLTTFENAGYKST
DDLSREGTPNSDRKSPDHQYVTIPESNGNNNGSVSSTELSRKKTNDYQSI
YGDVP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014791XLOC_014791Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00026328TCONS_00026328Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000082SEA_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000082SEA domainSMARTSM00200SEA_3coord: 1761..1862
e-value: 0.005
score: 26.1
IPR000082SEA domainPROSITEPS50024SEAcoord: 1761..1879
score: 12.155
IPR000082SEA domainSUPERFAMILY82671SEA domaincoord: 1774..1853
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1998..2055
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..1574

Blast
BLAST of TCONS_00026328-protein vs. Swiss-Prot (Human)
Match: SRRM5 (Serine/arginine repetitive matrix protein 5 OS=Homo sapiens GN=SRRM5 PE=1 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 1.613e-18
Identity = 127/380 (33.42%), Postives = 193/380 (50.79%), Query Frame = 0
Query:  433 SQSMSQSQSTSQSQSMSPSQSMSPSQSMSQSQSMSPSESLSPSQSMSSSQSLSPSESLSPSQSMSPSQSMSQSQSMSP------SESLSPSQSMSSSQSLSPSESLSPSQTMSPSQSMSQSQSMSPSQSMSHSQSMSPSQSMSPSQSMSQSQSTSQSQSMSPSQSMSPSESLSPSQSMSSSQSLSPSESLSPSQSMSSSQSMSPSESLSPSQSMSSSQSLSPSESLSPSQSMSPSQSMSQSQSMAPSESLSPSQSMSLSQSMSPSESMSQSQSVSPSESMSQSQSMSPSQSMSPSQSISQSQSMSSSQSMSPSQSMSPSQSMSPSHSMSQSQSMSSSESMSPSQSMSLSQSMSLSQSMSPSQSMSPSHSMSPSQSMSLSQ 806
            SQS S S+  SQ+QS +P +  S + S + S+  S S S S S+      S SP +    SQS SP++    S+S SP      S S SP ++   S+S SP+++   S++ SP ++  +S+S SP+++  HS+S SP+++   S+S S S+    SQ  SPS+      S SPS+     QS S S+     +S S S+     +S SP++    SQS SPSE     QS SPS+   + +  +PS+     QS S S+    S S S ++    S   + S+  + S+S +PS+  + SQS +SS+   PSQS  P                      SP    S +++ SLSQ+ +PS++ S S S  PS   +LSQ
Sbjct:  330 SQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQSTVP---------------------RSPDWKRSPTRTSSLSQNRTPSKTSSHSPSTFPSGGQTLSQ 688          

HSP 2 Score: 88.9669 bits (219), Expect = 1.559e-17
Identity = 134/424 (31.60%), Postives = 213/424 (50.24%), Query Frame = 0
Query:  931 SHSMSQSQSMSLSESMSPSQSMSPSQSMSSSQSMSLSQSMSLSQSMSPSQSMSSSQSMSQSQLMSQSQSMSPSESLSPSQSMSSSQSMSLSQSMSTSESMSLSQSLSSSQSMSQSQSVTPSESMSQSQSMSPSQSISQSQSMSSSQSMSPSQSMSPSKSMSPSQSMSPSQSMSQSQSMSATESMP------------------PSQSMSSSQSMSLSQSMSLSQSMSLSQSMSLSQSMSPSESMSQSQSVSPSESMSPIQSMSPSQSMSQSQSMSQSQSMSKSQSMSPSQSMSPSESMSQSQSMSHSQSMSPSQ----SMP--SSQSMSPSQSISPSYSVSQSQSMSSSQSMSPSQSMSPSQSMSPSQSMSPSQSMSPSQSMSPSQ--SMSPSESMSQSQSMSQSQSMSVSESMSASQSMLPSQ 1328
              S S SQ  + S   S S   + S++ S ++   LSQ    SQS S S+  S +QS +  +  S + S +PS+  S S S SSS+      S S  +    SQS S ++    S+S +P+++  +S+S SP ++  +S+S S +++   S+S SP K+   S+S SP+++   S+S S  ++                    PS+     +S S S+     QS S S+     +S SPS+   + QS SP++     QS SPS+     QS S S+   + +  SPS+     +S S S+   HS+S SP++    S P  SS+  + S+S +PS   + SQS +SS+   PSQS  P    SP    SP+++ S SQ+ +PS+  S SPS   S  Q++SQ  S +     + S++ LP +
Sbjct:  288 RRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQSTVP---RSPDWKRSPTRTSSLSQNRTPSKTSSHSPSTFPSGGQTLSQDDSQA---DATTSKATLPGE 705          

HSP 3 Score: 86.6557 bits (213), Expect = 7.206e-17
Identity = 133/406 (32.76%), Postives = 206/406 (50.74%), Query Frame = 0
Query: 1120 MSSSQSMSLSQSMSLSQSMSLSQSMSLSQSMSPSESMSQSQSVSPSESMSPIQSMSPSQSMSQSQSMSQSQSMSKSQSMSPSQSMSPSESMSQSQSMSHSQSMSPSQSMPSSQSMSPSQSISPSYSVSQSQSMSSSQSMSPSQSMSPSQSMSPSQSMSPSQSMSPSQSMSPSQSMSPSESMSQSQSMSQSQSMSVSESMSASQSMLPSQSMSPGESMSPSQSMSVSESMSQSQSLSPSKSMSPSQSMSPSQSMSPSQSISPSQSMSPSQSMLPSQSMSPSQSMSVSESMSPSQSMSASQSMSPSQSMSPSQSMSPSQSMSVSESMSPSQSMSASQSMSSSQSMSSSQSMSPSQSMSPSQSMSTSQSMSPSHSMSPSQSMSPSQSMSPSQ--SMSPSQSISQGQSMS 1523
             S S   + S++ S ++   LSQ    SQS S S+  SQ+QS +P    S   S +PS+  S S S S S+      S SP +    S+S S ++   HS+S SP+++   S+S SP       Y     ++   S+S SP+++   S+S SP ++   S+S SP+++   S+S SP+++  +S+S S S+    S+  S      PS+      S SPS+     +S S S+     +S SPS+     QS SP++    SQS SPS+     QS SPS+        SPS+     QS S S+    S+S SP++    S   + S+  + S+S + S+  + SQS + S+   PSQS       SP    SP+++ S SQ+ +PS+  S SPS   S GQ++S
Sbjct:  303 RSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSP-------Y-----KARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGS------PSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQSTVP---RSPDWKRSPTRTSSLSQNRTPSKTSSHSPSTFPSGGQTLS 687          

HSP 4 Score: 86.2705 bits (212), Expect = 1.068e-16
Identity = 139/403 (34.49%), Postives = 212/403 (52.61%), Query Frame = 0
Query:  235 SQSMSQSQPMSPSQSMSPSQSMSSSQSMSVSESMSQSQSMSPSQSMSVSESMSQSQSMSPSESLSPSQSMSPSQSMSLSQSMSTSESMSPSQSMSPSQSMSPSQSMSPSQSMSPSQSMSPSQSMSPSQSISQGQSMSSSQSMSPSQSMSLSQSMSPSQSMSPSQSMSPTQSMSQSQSMSASESMSPSQSMSPSKSMSPSQSMSQSQSTSQSQSMSPSQSMSPSQSMSQSQSMSPSESLSPSQSMSSSQSLSPSESLSPSQSMSPSQSMSQSQSMSPSES------LSPSQSMSSSQSLSPSESLSPSQTMSPSQSMSQSQSMSPSQSMSHSQSMSPSQSMSPSQSMSQSQSTSQSQSMSPSQSMSPSESLSPSQSMSSSQSLSPSE--SLSPSQSMSSSQSMS 629
             +S S SQ  + S+  S S   + S++ S +     SQ    SQS S S+  SQ+QS +P    S + S +PS+  S S S S+S+      S SP +    SQS SP++    S+S SP+++   S+S S  ++   S+S SP+++   S+S SP ++   S+S SP ++   S+S S +++   S+S SPSK    SQ  S S+     +S SPS+     QS S S+      S SPS+     QS SP++    SQS SPS+     QS SPS+        SPS+     QS S SE    S++ SP++    S+  + S+  +HS+S +PS+  + SQS + S+ +  SQS  P    SP    SP+++ S SQ+ +PS+  S SPS   S  Q++S
Sbjct:  288 RRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQSTVP---RSPDWKRSPTRTSSLSQNRTPSKTSSHSPSTFPSGGQTLS 687          
The following BLAST results are available for this feature:
BLAST of TCONS_00026328-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SRRM51.613e-1833.42Serine/arginine repetitive matrix protein 5 OS=Hom... [more]
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