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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00026328-protein ID=TCONS_00026328-protein|Name=TCONS_00026328-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2055bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00026328-protein vs. Swiss-Prot (Human)
Match: SRRM5 (Serine/arginine repetitive matrix protein 5 OS=Homo sapiens GN=SRRM5 PE=1 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 1.613e-18 Identity = 127/380 (33.42%), Postives = 193/380 (50.79%), Query Frame = 0
Query: 433 SQSMSQSQSTSQSQSMSPSQSMSPSQSMSQSQSMSPSESLSPSQSMSSSQSLSPSESLSPSQSMSPSQSMSQSQSMSP------SESLSPSQSMSSSQSLSPSESLSPSQTMSPSQSMSQSQSMSPSQSMSHSQSMSPSQSMSPSQSMSQSQSTSQSQSMSPSQSMSPSESLSPSQSMSSSQSLSPSESLSPSQSMSSSQSMSPSESLSPSQSMSSSQSLSPSESLSPSQSMSPSQSMSQSQSMAPSESLSPSQSMSLSQSMSPSESMSQSQSVSPSESMSQSQSMSPSQSMSPSQSISQSQSMSSSQSMSPSQSMSPSQSMSPSHSMSQSQSMSSSESMSPSQSMSLSQSMSLSQSMSPSQSMSPSHSMSPSQSMSLSQ 806
SQS S S+ SQ+QS +P + S + S + S+ S S S S S+ S SP + SQS SP++ S+S SP S S SP ++ S+S SP+++ S++ SP ++ +S+S SP+++ HS+S SP+++ S+S S S+ SQ SPS+ S SPS+ QS S S+ +S S S+ +S SP++ SQS SPSE QS SPS+ + + +PS+ QS S S+ S S S ++ S + S+ + S+S +PS+ + SQS +SS+ PSQS P SP S +++ SLSQ+ +PS++ S S S PS +LSQ
Sbjct: 330 SQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQSTVP---------------------RSPDWKRSPTRTSSLSQNRTPSKTSSHSPSTFPSGGQTLSQ 688 HSP 2 Score: 88.9669 bits (219), Expect = 1.559e-17 Identity = 134/424 (31.60%), Postives = 213/424 (50.24%), Query Frame = 0
Query: 931 SHSMSQSQSMSLSESMSPSQSMSPSQSMSSSQSMSLSQSMSLSQSMSPSQSMSSSQSMSQSQLMSQSQSMSPSESLSPSQSMSSSQSMSLSQSMSTSESMSLSQSLSSSQSMSQSQSVTPSESMSQSQSMSPSQSISQSQSMSSSQSMSPSQSMSPSKSMSPSQSMSPSQSMSQSQSMSATESMP------------------PSQSMSSSQSMSLSQSMSLSQSMSLSQSMSLSQSMSPSESMSQSQSVSPSESMSPIQSMSPSQSMSQSQSMSQSQSMSKSQSMSPSQSMSPSESMSQSQSMSHSQSMSPSQ----SMP--SSQSMSPSQSISPSYSVSQSQSMSSSQSMSPSQSMSPSQSMSPSQSMSPSQSMSPSQSMSPSQ--SMSPSESMSQSQSMSQSQSMSVSESMSASQSMLPSQ 1328
S S SQ + S S S + S++ S ++ LSQ SQS S S+ S +QS + + S + S +PS+ S S S SSS+ S S + SQS S ++ S+S +P+++ +S+S SP ++ +S+S S +++ S+S SP K+ S+S SP+++ S+S S ++ PS+ +S S S+ QS S S+ +S SPS+ + QS SP++ QS SPS+ QS S S+ + + SPS+ +S S S+ HS+S SP++ S P SS+ + S+S +PS + SQS +SS+ PSQS P SP SP+++ S SQ+ +PS+ S SPS S Q++SQ S + + S++ LP +
Sbjct: 288 RRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQSTVP---RSPDWKRSPTRTSSLSQNRTPSKTSSHSPSTFPSGGQTLSQDDSQA---DATTSKATLPGE 705 HSP 3 Score: 86.6557 bits (213), Expect = 7.206e-17 Identity = 133/406 (32.76%), Postives = 206/406 (50.74%), Query Frame = 0
Query: 1120 MSSSQSMSLSQSMSLSQSMSLSQSMSLSQSMSPSESMSQSQSVSPSESMSPIQSMSPSQSMSQSQSMSQSQSMSKSQSMSPSQSMSPSESMSQSQSMSHSQSMSPSQSMPSSQSMSPSQSISPSYSVSQSQSMSSSQSMSPSQSMSPSQSMSPSQSMSPSQSMSPSQSMSPSQSMSPSESMSQSQSMSQSQSMSVSESMSASQSMLPSQSMSPGESMSPSQSMSVSESMSQSQSLSPSKSMSPSQSMSPSQSMSPSQSISPSQSMSPSQSMLPSQSMSPSQSMSVSESMSPSQSMSASQSMSPSQSMSPSQSMSPSQSMSVSESMSPSQSMSASQSMSSSQSMSSSQSMSPSQSMSPSQSMSTSQSMSPSHSMSPSQSMSPSQSMSPSQ--SMSPSQSISQGQSMS 1523
S S + S++ S ++ LSQ SQS S S+ SQ+QS +P S S +PS+ S S S S S+ S SP + S+S S ++ HS+S SP+++ S+S SP Y ++ S+S SP+++ S+S SP ++ S+S SP+++ S+S SP+++ +S+S S S+ S+ S PS+ S SPS+ +S S S+ +S SPS+ QS SP++ SQS SPS+ QS SPS+ SPS+ QS S S+ S+S SP++ S + S+ + S+S + S+ + SQS + S+ PSQS SP SP+++ S SQ+ +PS+ S SPS S GQ++S
Sbjct: 303 RSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSP-------Y-----KARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGS------PSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQSTVP---RSPDWKRSPTRTSSLSQNRTPSKTSSHSPSTFPSGGQTLS 687 HSP 4 Score: 86.2705 bits (212), Expect = 1.068e-16 Identity = 139/403 (34.49%), Postives = 212/403 (52.61%), Query Frame = 0
Query: 235 SQSMSQSQPMSPSQSMSPSQSMSSSQSMSVSESMSQSQSMSPSQSMSVSESMSQSQSMSPSESLSPSQSMSPSQSMSLSQSMSTSESMSPSQSMSPSQSMSPSQSMSPSQSMSPSQSMSPSQSMSPSQSISQGQSMSSSQSMSPSQSMSLSQSMSPSQSMSPSQSMSPTQSMSQSQSMSASESMSPSQSMSPSKSMSPSQSMSQSQSTSQSQSMSPSQSMSPSQSMSQSQSMSPSESLSPSQSMSSSQSLSPSESLSPSQSMSPSQSMSQSQSMSPSES------LSPSQSMSSSQSLSPSESLSPSQTMSPSQSMSQSQSMSPSQSMSHSQSMSPSQSMSPSQSMSQSQSTSQSQSMSPSQSMSPSESLSPSQSMSSSQSLSPSE--SLSPSQSMSSSQSMS 629
+S S SQ + S+ S S + S++ S + SQ SQS S S+ SQ+QS +P S + S +PS+ S S S S+S+ S SP + SQS SP++ S+S SP+++ S+S S ++ S+S SP+++ S+S SP ++ S+S SP ++ S+S S +++ S+S SPSK SQ S S+ +S SPS+ QS S S+ S SPS+ QS SP++ SQS SPS+ QS SPS+ SPS+ QS S SE S++ SP++ S+ + S+ +HS+S +PS+ + SQS + S+ + SQS P SP SP+++ S SQ+ +PS+ S SPS S Q++S
Sbjct: 288 RRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQSTVP---RSPDWKRSPTRTSSLSQNRTPSKTSSHSPSTFPSGGQTLS 687 The following BLAST results are available for this feature:
BLAST of TCONS_00026328-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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