TCONS_00026287-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00026287-protein
Unique NameTCONS_00026287-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length148

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00026287-protein ID=TCONS_00026287-protein|Name=TCONS_00026287-protein|organism=Clytia hemisphaerica|type=polypeptide|length=148bp
LHFHVGSINHLSRKQKGGYTALHIAAMHGRENIIRKLVNDYAQNLDCRDY
SGRKPKHYLDENSSRNIRCILSPVKKTDALDVPDANSIPNHKSISPRLMK
NDHHKNEENKTRHRPTLSLSNSFKRTKKLLEKHSPGSRAQRTAQSHEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014770XLOC_014770Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00026287TCONS_00026287Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 17..47
e-value: 3.8E-4
score: 29.8
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 18..49
e-value: 6.3E-5
score: 23.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 17..39
score: 9.137
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 4..146
e-value: 1.0E-9
score: 37.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 17..58
score: 10.339
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 13..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..123
NoneNo IPR availableCDDcd00204ANKcoord: 16..58
e-value: 8.14931E-6
score: 40.4447

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026287-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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