TCONS_00026099-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00026099-protein
Unique NameTCONS_00026099-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2682

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00026099-protein ID=TCONS_00026099-protein|Name=TCONS_00026099-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2682bp
MPIFRWGSKSSASVLPRRQDDSRSPADQSALADRAVGALSDERDYIQQKV
FTKWCNIHLSKVGKEIDDILEDFRDGKKLLILLELLSNEKLRYQKGKTRF
HCLQNLNSALDFLRKKEIKIVNIRSEEILDGNTKLTLGLIWIIILNFQIS
NVDISYDDETISPKTALLHWCQSYVDGYPNVKVTNFTTSWTDGYAFNAIL
HRYRPDLIDFANLEENAPVQRVESAFNVAEKHFGVQQLLDAEDVVKNPDE
KSIITYISFINKVLPTKAPTLLLKQSELFDKQTKTYHKNIQVFIKWVKTT
IVILDKRDFPEELAKLQDINSQLMFMITDTIPDREAQKRSILTSYNDLKL
MENPKKQAVESPNEAAKENLDNLWNTLLSSVQKRKIDLKMKIDSAKHLHH
LAEKFNTDASMLESSFEDVEKEIDTIEENLPHVAQAVSAQKLDQIGKALL
MFRLSIKSMSTSIDLLQQGNFDGNEQMTERLKLIVFRWEALKDRINSIII
NISGKPVITVSVLIEEDIVSPLRLHVKPSSVPASPTESESPLSPTPESAS
LDDMVVDDESETIEDSPMPEGAAAVAESPKEGKEKRKRGSIMSRFSFKRS
KRETGSPKPSSPKKKSKKGSFSWTSQNVDGTLQQMRLTSHWVKFKLDALL
NDQFGKDLVSNENLLKENEELLSEIENHQVDIDKYDELKGVPPEVEEQRT
LLKVSFNDLRSKTNVRQENLISVVEWLRLATQQLVKMNQLEDVELSRDWS
NRNAEFETLQDVFKSMEPIREERESKVNHICKEGDRLLIVSHPASKTIKA
YIGVLKNQVVWLQEITKAFVVHHKNLKIYRKFYQDAHEIETWLTLTVEQL
QGILQEKNLKDLPTILRIIYMLLEIRQDLLDHRSQINQLVEDSKKVPPLK
SRYEGIKDTKTVISVCDYSPEQEAVKKGDVFELKNNDDQYKWKVSRPSDE
EDLQIPSVCFVIPAPDNDGVELATRIEIQYRHLLTLWQNRQWHLKQTLSS
SEVTTNLKVLKTADIPKLELGELGTALSKDDVEKMILQLGEDLDPTLVSD
DEAIVPDLDSISQQFXVSDDEAIVPDLDSISQQFIASQQPVEEEPKVIVE
EEIPVQSVPEDESVPDFPTEHTKRPPIVEETVSEQYVPQDEQVPELPGGQ
ADEPDMGNRGSKDDEVMMEIEEEIVDEVIVEDVELLFDWLNEQEKEIQSK
DTTAFDTDSIQPEIKAAKKNAHTLNTVLKPKYENLLETEKTAKNPQVKYK
ITVIKEKWIFITEYIIEWEIRVINAQSLLQIAERLDSWLSDLEHSLIKQH
GITTDLSDLHRQINEILVWEKDYSTTTPVVKKLQAASSKFKEGEFVDTNQ
LVQRWQDVGQQLVYRKKGLLARIPEMSHLKQCIASENWWLNISYSVIKDC
STLPENTRDQKKLLLSYKKITKEIPVHRKSIQQLFHDTESYISNCLVYQG
DLKRFRRAVDPTLNVTSFYYVPYESRQWLGRRMKELSQLYELLLTIVPQR
IEVILQKNQQALSSRNITNNTPGKLSFDLDELLKWIGEREKELASELPNF
NSWNIKKLKKTIVPYTKRMEGSRKVLISNADRVNRTLDFGHDQMDDESFV
SSSTELTSEDRVGIQAKLLSLELRWAKLQWECEGRNMRLQTIHDLLTDYE
RAIAPFMVWLQKAELQAENFNVNGIDLESVQDIYRRHQTFVKEVRKKEGD
LTKVNNHGEAFLAEAKAFQKELETYLASIPDPLSSQASASSQTWVLEQKL
HEINERYRKLIRTLSFKETLINESIAKHQEYLHKVQSFLPWLADAERHLA
REIHEQVPSDAKRLQKKIDNVKRFHSGVQAHHNELVNIQIASDVLTGLEK
RTSQLSSAEGKPQANVSHGTWLRTTISVMKRYEELCINVVNFESRLQSLH
MTVQNFKDGLDLTYKWADATQQSMQKMTVVSYEIEILIRQVREIKIILLE
LEGRNSSLDSLSKIYEQRKKDSSVVKQIERLKKIQVIFTDLHSRTDQRKI
ECTISFKRYLSNFEEWADRTLQVLQSGELVTTDILQFEDNLQKISDDVEK
NRPSFQYINQCGHELISMDRSRQTSEHLPLLDRINKKWQAITLQLINHTR
KFDEVVKCSEKYHSLLQPLLQWFDRMEGRVTTLAPVAIQSQVLIEQLGEQ
KSLLNDAYNHKGTIEILSTIGEALVFIVYIQDKSKKDKVERTAIEDEVSR
IRARFNDIVTILESRGVNLEATLTEAEQYQTLHVDVLAWLESAEEAQRKW
SPIGNDLITLRKQYLDHQVYQRDLNNASSNVQDVLDSGRSLLENRTNARG
STQVRAQIESIEIRWETLIKKAGNRQDALEHGFGTRFQDEVKRITLWIDR
RTQEVDQLDQSNETPDRIKTYIKEIVVEIEIYEEIIYIIHQSANQMMTSK
IIEQVPFFQLVSDVDDKWMVLREKYQNSRQLSGYVNLRTPMEIETDRAGK
ETVFLVSTDSRKRRLVPGEEEEVSESKIPVLEKGVSYNLTFAPTALPASS
PTQNTSFETTVRRRTRLDEDPEDVFSSPKEEVYTIDEQGRKVRKIVTKKV
TRTQRRIIRRKYRDENGEERIEEMEVPDDQEMPVTTEDSLVVQHRPDETD
TATEEELIRDADGNIIKRIVKKVTHVTKRTRIIRKTIIDEYGNKRVVEQE
VPIEDDEEEPFIVIDEAPVQSEPELPPESPNQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014674XLOC_014674Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00026099TCONS_00026099Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018159Spectrin/alpha-actinin
IPR001715CH-domain
IPR002017Spectrin_repeat
IPR001589Actinin_actin-bd_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 409..429
NoneNo IPR availableCOILSCoilCoilcoord: 661..688
NoneNo IPR availableGENE3D1.20.58.60coord: 625..719
e-value: 0.003
score: 17.2
NoneNo IPR availableGENE3D1.20.58.60coord: 720..806
e-value: 0.0081
score: 15.7
coord: 1788..1887
e-value: 1.6E-6
score: 27.6
NoneNo IPR availableGENE3D1.20.58.60coord: 2347..2431
e-value: 0.43
score: 10.1
coord: 1888..2001
e-value: 3.8E-4
score: 20.0
coord: 377..498
e-value: 3.4E-4
score: 20.1
coord: 807..996
e-value: 5.3E-9
score: 35.7
NoneNo IPR availableGENE3D1.20.58.60coord: 1177..1267
e-value: 0.29
score: 11.0
NoneNo IPR availableGENE3D1.20.58.60coord: 280..376
e-value: 0.0056
score: 16.3
NoneNo IPR availableGENE3D1.20.58.60coord: 2237..2346
e-value: 1.7E-14
score: 53.4
coord: 1389..1536
e-value: 8.4E-5
score: 22.0
coord: 2122..2236
e-value: 5.4E-10
score: 38.8
coord: 1655..1787
e-value: 7.9E-18
score: 64.2
coord: 1537..1654
e-value: 4.1E-8
score: 32.8
coord: 2003..2121
e-value: 1.5E-8
score: 34.1
NoneNo IPR availableGENE3D1.20.58.60coord: 1268..1373
e-value: 5.3E-4
score: 19.7
NoneNo IPR availableCDDcd00176SPECcoord: 1645..1845
e-value: 1.95499E-11
score: 64.004
NoneNo IPR availableCDDcd00176SPECcoord: 2110..2330
e-value: 5.00523E-15
score: 75.5599
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 280..388
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 1474..1502
coord: 1349..1447
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 693..817
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 1605..1728
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 1740..1847
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 1878..1999
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 633..720
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 2189..2330
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 1275..1369
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 776..896
NoneNo IPR availableSUPERFAMILY46966Spectrin repeatcoord: 2053..2175
IPR018159Spectrin/alpha-actininSMARTSM00150SPEC_4coord: 1647..1772
e-value: 9.8E-8
score: 41.7
coord: 2227..2330
e-value: 1.5E-12
score: 57.7
coord: 2110..2220
e-value: 0.2
score: 18.1
coord: 2004..2103
e-value: 0.53
score: 13.4
coord: 284..389
e-value: 0.83
score: 11.3
coord: 830..995
e-value: 0.52
score: 13.5
coord: 1523..1640
e-value: 2.3
score: 6.4
coord: 1779..1897
e-value: 1.8
score: 7.6
coord: 633..721
e-value: 0.45
score: 14.3
coord: 1276..1370
e-value: 0.44
score: 14.3
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 163..260
e-value: 5.4E-20
score: 82.4
coord: 47..146
e-value: 2.2E-16
score: 70.5
IPR001715Calponin homology domainPFAMPF00307CHcoord: 162..262
e-value: 3.9E-21
score: 75.2
coord: 47..148
e-value: 9.8E-18
score: 64.2
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 160..266
e-value: 1.3E-26
score: 92.2
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 44..152
e-value: 2.4E-30
score: 104.4
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 161..264
score: 14.881
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 45..148
score: 16.093
IPR001715Calponin homology domainCDDcd00014CHcoord: 46..148
e-value: 2.45624E-11
score: 62.3283
IPR001715Calponin homology domainCDDcd00014CHcoord: 162..260
e-value: 4.1893E-21
score: 91.2183
IPR001715Calponin homology domainSUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 36..260
IPR002017Spectrin repeatPFAMPF00435Spectrincoord: 1645..1726
e-value: 2.0E-7
score: 31.3
coord: 2226..2330
e-value: 3.8E-9
score: 36.9
IPR001589Actinin-type actin-binding domain, conserved sitePROSITEPS00019ACTININ_1coord: 47..56
IPR001589Actinin-type actin-binding domain, conserved sitePROSITEPS00020ACTININ_2coord: 120..144

Blast
BLAST of TCONS_00026099-protein vs. Swiss-Prot (Human)
Match: MACF1 (Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 OS=Homo sapiens GN=MACF1 PE=1 SV=4)

HSP 1 Score: 278.87 bits (712), Expect = 1.487e-74
Identity = 152/380 (40.00%), Postives = 230/380 (60.53%), Query Frame = 0
Query:   32 ADRAVGALSDERDYIQQKVFTKWCNIHLSKVGKEIDDILEDFRDGKKLLILLELLSNEKLRYQKGKTRFHCLQNLNSALDFLRKKEIKIVNIRSEEILDGNTKLTLGLIWIIILNFQISNVDISYDDETISPKTALLHWCQSYVDGYPNVKVTNFTTSWTDGYAFNAILHRYRPDLIDFANLEENAPVQRVESAFNVAEKHFGVQQLLDAEDV-VKNPDEKSIITYISFINKVLPTKAPTLLLKQSELFDKQTKTYHKNIQVFIKWVKTTIVILDKRDFPEELAKLQDINSQLMFMITDTIPDREAQKRSILTSYNDLKL-MENPKKQAVESPNEAAKENLDNLWNTLLSSVQKRKIDLKMKIDSAKHLHHLAEKFNTDA 409
            A+RAV  ++DERD +Q+K FTKW N HL KV K I+D+ ED RDG  L+ LLE+LS  KL  +KG+ RFH LQN+  ALDFL+++++K+VNIR+++I DGN KLTLGLIW IIL+FQIS++ IS +   +S K  LL W Q    GY  +K TNF++ W+DG  FNA++HRYRPDL+D   ++  +  + +E AF VAE+  GV +LLDAEDV V +PDEKS+ITY+S I    P          +   D + + Y   +   I W+K   +++  + FP+   +L+ + +Q +      I  +E +K  I   Y  L++ +E  +   ++ P      +++  W  L+  + +R+  L+  ++  + L  +A K    A
Sbjct:   65 AERAVVRVADERDRVQKKTFTKWVNKHLMKVRKHINDLYEDLRDGHNLISLLEVLSGIKLPREKGRMRFHRLQNVQIALDFLKQRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQISDIYISGESGDMSAKEKLLLWTQKVTAGYTGIKCTNFSSCWSDGKMFNALIHRYRPDLVDMERVQIQSNRENLEQAFEVAER-LGVTRLLDAEDVDVPSPDEKSVITYVSSIYDAFPKVPEGGEGISATEVDSRWQEYQSRVDSLIPWIKQHTILMSDKTFPQNPVELKALYNQYIHFKETEILAKEREKGRIEELYKLLEVWIEFGR---IKLPQGYHPNDVEEEWGKLIIEMLEREKSLRPAVERLELLLQIANKIQNGA 440          

HSP 2 Score: 147.902 bits (372), Expect = 5.735e-35
Identity = 94/323 (29.10%), Postives = 176/323 (54.49%), Query Frame = 0
Query:  702 LKVSFNDLRSKTNVRQENLISVVEWLRLATQQLVKMNQLEDVELSRDWSNRNAEFETLQDVFKSMEPIREERESKVNHICKEGDRLLIVSHPASKTIKAYIGVLKNQVVWLQEITKAFVVHHKNLKIYRKFYQDAHEIETWLTLTVEQLQGILQEKNLKDLPTILRIIYMLLEIRQD----LLDHRSQINQLVEDSKKVPPLKSRYEG--IKDTKTVISVCDYSPEQEAVKKGDVFELKNNDDQYKWKVSRPSDEEDLQIPSVCFVIPAPDNDGVELATRIEIQYRHLLTLWQNRQWHLKQTLSSSEVTTNLKVLKTADIPKL 1018
            L+  +  L+  ++ R  +L S+ +++  AT +L+ +N+ E+ EL+ DWS+ N+     ++ F  +    EE++     +    + L + +HPA +T++AY   +++Q+ W++++      H K    Y +F+ DA E+E++L      LQ  ++ K   D  T L  +  LL+   D    L+  +S +  LV  SK +  LK R     +K+T +V +VCDY   +  + K D   L++N  + KWKV  P+  E + +PSVCF+IP P+ D +E+A+R+E  Y+ ++ LW     + K  +S + +  +L +++T ++ KL
Sbjct:  661 LETQYCKLKETSSFRMRHLQSLHKFVSRATAELIWLNEKEEEELAYDWSDNNSNISAKRNYFSELTMELEEKQDVFRSLQDTAELLSLENHPAKQTVEAYSAAVQSQLQWMKQLCLCVEQHVKENTAYFQFFSDARELESFL----RNLQDSIKRKYSCDHNTSLSRLEDLLQDSMDEKEQLIQSKSSVASLVGRSKTIVQLKPRSPDHVLKNTISVKAVCDYRQIEITICKNDECVLEDNSQRTKWKVISPTGNEAM-VPSVCFLIPPPNKDAIEMASRVEQSYQKVMALWHQLHVNTKSLISWNYLRKDLDLVQTWNLEKL 978          

HSP 3 Score: 96.6709 bits (239), Expect = 1.975e-19
Identity = 170/861 (19.74%), Postives = 353/861 (41.00%), Query Frame = 0
Query: 1529 LDELLKWI---GEREKELASELPNFNSWNIKKLKKTIVPYTKRMEGSRKVLISNADRVNRTLDFGHDQM--DDESFVSSSTE-----------LTSEDRVGIQAKLLSLELRWAKLQWECEGRNMRLQTIHDLLTDYERAIAPFMVWLQKAELQAENFNVNGIDLESVQDIYRRHQTFVKEVRKKEGDLTKVNNHGEAFLAEAKAFQKELETYLASIPDPLSSQASASSQTWVLEQKLHEINERYRKLIRTLSFKETLINESIAKHQEYLHKVQSFLPWLADAERHLAREIHEQVPSDAKRLQKKIDNVKRFHSGVQAHHNELVNIQ-IASDVLTGLEKRTSQLSSAEGKPQANVSHGTWLRTTISVMKRYEELCINVVNFESRLQSLHMTVQNFKDGLDLTYKWADATQQSMQKMTVVSYEIEILIRQVREIKIILLELEGRNSSLDS----LSKIYEQRKKDSSVVKQIERLKKIQVIFTDLHSRTDQRKIECTIS--------FKRYLSNFEEWADRTLQVLQSGELVTTDILQFEDNLQKISDDVEKNRPSFQYINQCGHELISMDRSRQTSEHLPLLDRINKKWQAITLQLINHTRKFDEVVKCSEK---YHSLLQPLLQWFDRMEGRVTTLAPVAIQSQVLIEQLGEQKSLLNDAYNHKGT----IEILSTIGEALVFIVYIQDKSKKDKV-------------------ERTAIEDEVSRIRARFNDIVTILESRGVNLEATLTEAEQYQTLHVDVLAWLESAEEAQRKW----SPIGNDLITLRKQYLDHQVYQRDLNNASSNVQDVLDSGRSLLENRTNARGSTQVRAQIESIEIRWETLIKKAGNRQDALE 2330
            +D LL W+   G    +L + LP     +   L+K  +  T    G  +      D+    +   H ++    ++F+ ++             LT E++  +Q KL  L+ +++    + E    ++QT+ D L  + +    F  WL+++E + EN +  G   E++  + +R  +F ++V   +GDL  V   G+  L    +F++  E      P  + +         +++ KL +  ERY  L    +   + +N  + ++ ++ +   S   W+   E ++ + + + V SD   LQ+++   K+    +  H   +  +Q +A D++             EG+P  +  H     TT S++  ++ L  ++    S LQ      Q+ ++ L+   +     +Q+++   V S    ++   +     +  ++  + SSL++    +++  E     ++ V Q  +L ++   F  L     Q++ E ++         F+      +++ +   ++L SG     DI  F   +Q+++ ++E  + +   +     EL S   +    +H   +  + K +    LQ     R+ D    C E+   +  L++   +W    EG +      ++ ++ L +Q+   KSLL+D +  KGT    I    T  E L+  +   D   K                      + T I+ ++S +  ++  +  +L  R  +L+A L   E+       VL WLES EE  +      SP   +  T++ Q   ++ +  +L   S  +Q V ++   LL    N++ +   +   E +  RWE   +    RQ  LE
Sbjct: 3752 IDALLDWVTSVGSSGGQLLTNLPGMEQLSGASLEKGALDTTDGYMGVNQA-PEKLDKQCEMMKARHQELLSQQQNFILATQSAQAFLDQHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSEAELKQVQTLQDELQKFLQDHKEFESWLERSEKELENMHKGGSSPETLPSLLKRQGSFSEDVISHKGDLRFVTISGQKVLDMENSFKEGKE------PSEIGN---------LVKDKLKDATERYTALHSKCTRLGSHLNMLLGQYHQFQNSADSLQAWMQACEANVEKLLSDTVASDPGVLQEQLATTKQLQEELAEHQVPVEKLQKVARDIM-----------EIEGEPAPDHRHVQ--ETTDSILSHFQSLSYSLAERSSLLQKAIAQSQSVQESLESLLQSIGEVEQNLEGKQVSSLSSGVIQEALATNMKLKQDIARQKSSLEATREMVTRFMETADSTTAAVLQ-GKLAEVSQRFEQLC--LQQQEKESSLKKLLPQAEMFEHLSGKLQQFMENKSRMLASGNQPDQDITHFFQQIQELNLEMEDQQENLDTLEHLVTELSSCGFALDLCQHQDRVQNLRKDF--TELQKTVKEREKD-ASSCQEQLDEFRKLVRTFQKWLKETEGSIPP-TETSMSAKELEKQIEHLKSLLDD-WASKGTLVEEINCKGTSLENLIMEITAPDSQGKTGSILPSVGSSVGSVNGYHTCKDLTEIQCDMSDVNLKYEKLGGVLHERQESLQAILNRMEEVHKEANSVLQWLESKEEVLKSMDAMSSPTKTE--TVKAQAESNKAFLAELEQNSPKIQKVKEALAGLLVTYPNSQEAENWKKIQEELNSRWERATEVTVARQRQLE 4573          
The following BLAST results are available for this feature:
BLAST of TCONS_00026099-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MACF11.487e-7440.00Microtubule-actin cross-linking factor 1, isoforms... [more]
back to top