TCONS_00025769-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00025769-protein
Unique NameTCONS_00025769-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length515

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00025769-protein ID=TCONS_00025769-protein|Name=TCONS_00025769-protein|organism=Clytia hemisphaerica|type=polypeptide|length=515bp
RGRGRGRGEGVRMRGGKKVNPWKEWNDGPFQPEIPIFNQNVGPTVEVPES
VSDIVSLFLTDELMSYIVVQTNLYANQFIESADISNQSRVNDWKDVTENE
LKNYFALSMLMGIHSLPQIPDYWSTHPFYHNPVYNSVMSRNRYQLISRFI
HFNDNTNYVPKDPKRDRLFKIRPLLNYLNTKFQELYYPSRDVSIDEQLLL
HKGNLHFKQYIPNKRARFGIKFFSLCDESGHAQVVPAQEELKKLGISGQV
VVRLMNPLLDKGHRLFTDNWYTGVPLFQYLQKHQTPACGTLRKNRGGFPK
EFTAGKLEKGETRHFVNDKLLALRFQDSKEVFFISTMHRPKLVTVPKKAR
NGDNIMKEQLVVDYNHKMGFVDKNDAVTSQHSMVRKAFKWTTKCAFHLLE
EVMFNAHVFHLQTAADRVLTYTDFKLMFIEETFAKIDAYKALYSHPTTGA
HDPEPVPATNPNQRRIPTKRCVQCYKLGIRRESRYQCDTCIVHPGLCVYP
CFREYHTPDEEQQQQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014475XLOC_014475Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00025769TCONS_00025769Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029526PGBD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029526PiggyBac transposable element-derived proteinPFAMPF13843DDE_Tnp_1_7coord: 53..407
e-value: 6.4E-87
score: 292.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24

Blast
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BLAST of TCONS_00025769-protein vs. Swiss-Prot (Human)
Match: PGBD4 (PiggyBac transposable element-derived protein 4 OS=Homo sapiens GN=PGBD4 PE=2 SV=3)

HSP 1 Score: 250.751 bits (639), Expect = 3.126e-76
Identity = 168/495 (33.94%), Postives = 255/495 (51.52%), Query Frame = 0 
Query:   51 VSDIVS------LFLTDELMSYIVVQTNLYANQFIESA-DISNQSRVNDWKDVTENELKNYFALSMLMGIHSLPQIPDYWSTHPFYHNPVYNSVMSRNRYQLISRFIHFNDNTNYVPKDPKRD-RLFKIRPLLNYLNTKFQELYYPSRDVSIDEQLLLHKGNLHFKQYIPNKRARFGIKFFSLCD-ESGHA-----------QVVPAQEELKKLGISGQVVVRLMNPLLDKGHRLFTDNWYTGVPLFQYLQKHQTPACGTLRKNRGGFPKEFTAGKLEKGETRHFVNDKLLALRFQDSKEVFFISTMHRPKLVTVPKKARNGDNIMKEQLVVDYNHKMGFVDKNDAVTSQHSMVRKAFK-WTTKCAFHLLEEVMFNAHVFHLQTAADRVLTYTDFKLMFIEETFAK--IDAYKALYSHPT---------TGAHDPEPVPATNPNQRRIPTKRCVQCY----KLG--IRRESRYQCDTCIVHPGLCVYPCFREYHT 507
            VSDI        LF T+EL+S I  +TN  A             SR++ WKD   +ELK +FA+ +L GI   P++  +WST P    P    +M+  R+ L+ R +HF +N++      K    L KI+P+ ++L  KF  +Y P+R++++DE L+L KG L  KQY+P KR RFG+K + LC+ +SG+             +  + + LK    S ++V+ L+N LL +G+ +F DN+     LF+ L +++T A GT R NR   P +    ++ KG T      +L+AL++ D KEV  +ST H   ++ V    RNG    + +++VDYN  MG VD  D + + +   RK  K W  K   HLL   + N+++   +   +  +++ +F+L  IE    K      + L   P          +G H P+ +PAT+  Q   PT RC  C     K G  IR+E+RY C  C V   LCV PCF  YHT
Sbjct:   98 VSDITDPLQYFELFFTEELVSKITRETNAQAALLASKPPGPKGFSRMDKWKDTDNDELKVFFAVMLLQGIVQKPELEMFWSTRPLLDTPYLRQIMTGERFLLLFRCLHFVNNSSISAGQSKAQISLQKIKPVFDFLVNKFSTVYTPNRNIAVDESLMLFKGPLAMKQYLPTKRVRFGLKLYVLCESQSGYVWNALVHTGPGMNLKDSADGLK----SSRIVLTLVNDLLGQGYCVFLDNFNISPMLFRELHQNRTDAVGTARLNRKQIPNDLKK-RIAKGTTVARFCGELMALKWCDGKEVTMLSTFHNDTVIEV--NNRNGKKTKRPRVIVDYNENMGAVDSADQMLTSYPSERKRHKVWYKKFFHHLLHITVLNSYILFKKDNPEHTMSHINFRLALIERMLEKHHKPGQQHLRGRPCSDDVTPLRLSGRHFPKSIPATSGKQN--PTGRCKICCSQYDKDGKKIRKETRYFCAECDV--PLCVVPCFEIYHT 581
The following BLAST results are available for this feature:
BLAST of TCONS_00025769-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PGBD43.126e-7633.94PiggyBac transposable element-derived protein 4 OS... [more]
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